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Detailed information on CNT30313897


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30121209Camelina sativaCitrus clementina35.2933.0986.67180reverse complement

Expression of CNT30313897

Peptides detected in this lncRNA

>peptide 1 (31 aa)
FLNIFVFLLGLVFVTIPFFVFQKDDKPFQFF*

>peptide 2 (47 aa)
MNRFYSSDIVIHDISFIRYHRNLIHLSEFTSERFLISMGLNPEIFQRK

>peptide 3 (53 aa)
MINPFNFFDFKLNFVLVFSILISIVYLRFFRNPFCSKSKKFFMILHQMIVQGK*

Sequence

>CNT30313897
TTTTTTTGAATATTTTCGTTTTTTTACTGGGACTCGTCTTTGTCACAATCCCTTTTTTTGTTTTCCAAAAAGATGATAAACCCTTTCAATTTTTTTGATT
TCAAATTGAACTTCGTACTTGTTTTCTCTATATTGATTTCTATTGTTTATTTAAGGTTCTTTAGAAACCCTTTTTGTTCGAAGTCGAAAAAGTTTTTTAT
GATACTTCATCAGATGATTGTACAAGGAAAATAAACAACTAGGTTGTAGAAAAGAAAGCGGTGAAAAAGAATCATAAATAAATAGTTTTTTATTGGATCA
GGAATCTCATTATGTATTCGGTGTGGATAAAAGATCTTCCTATGTTATACTATTAAATTCTTGACGATGAATCGATTTTATAGCTCCGATATTGTTATTC
ATGATATTTCTTTCATTCGATATCATCGAAATCTAATTCATCTGAGTGAGTTTACAAGCGAAAGATTTCTCATCTCTATGGGATTAAATCCCGAGATATT
CCAAAGAAAA