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Detailed information on CNT3031367

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3024461	Theobroma cacao	Populus trichocarpa	20.06	22.03	83.92	143	forward

Expression of CNT3031367

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MLGQDFYQGNAEESHQLGSNYFQENPFEVGFELSIFRTAFFRHEHTADGRAVWKVARVRVLPKVDSCMESRSNPYYNGAGMNQLFESLHA

>peptide 2 (77 aa)
MVLHQLSIYQGSLLCPRYTSSGECLDRISIRETPRRVISWEVTIFRKTLSKLVSSSAYSGLPFSGMNIRLMVGRFGR*

Sequence

>CNT3031367
TTATTAAAGAAAACACAATACACTCGCATTGGAAATTTTATTGATGAGTTGCAATGATAGCAACCTTTATTTTCTTTTAGGACAAGGACAGCTATAAACT
AGAACCTATGGATACCACCACTTTTACCATTTGGGCTAAGCCCAAGTAGCAATACCAATATTTATTTTCATAGATTTTGCAAAGAAGTTCTTTAGATTGA
GACACTGTTGGGAATTCCCTTGCCAGTGAGTCCACTTTCACTGGTAGGGAACAATAGAGTGTATAGCACATTGACTGGGCCAGAACGATTCTTCAATGTC
TTATCATGATTCATCTGAATAATCCTTTGCTCAATCTGTGAAAGCTTGTTTCCGAAATCATTGAAAGCTTTCAATGGTGCTGCATCAGTTGTCCATTTAT
CAGGGGTCGCTTCTTTGTCCGAGGTACACCTCGTCTGGAGAATGCTTGGACAGGATTTCTATCAGGGAAACGCCGAGGAGAGTCATCAGCTGGGAAGTAA
CTATTTTCAGGAAAACCCTTTCGAAGTTGGTTTCGAGCTCAGCATATTCAGGACTGCCTTTTTCAGGCATGAACATACGGCTGATGGTAGGGCGGTTTGG
AAGGTAGCCCGCGTAAGGGTATTGCCCAAAGTTGACAGCTGCATGGAGAGCAGAAGCAACCCATATTATAATGGTGCAGGAATGAATCAGCTCTTCGAGA
GTCTGCATGCTAG