Detailed information on CNT30309608


BLAST search results

BLAST vs Swiss-Prot:
sp|F8S1I0|C7BL2_LACSA, E-value = 3e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376290Camelina sativaArabidopsis thaliana51.3240.6788.66194forward
CNT30541490Camelina sativaBrassica napus94.9752.6484.68359forward
CNT30234593Camelina sativaBrassica oleracea37.5766.0586.62142forward
CNT3074793Camelina sativaBrassica juncea31.4830.5187.39119forward
CNT30260872Camelina sativaBrassica rapa94.9725.3584.68359forward
CNT30480128Camelina sativaArabidopsis halleri97.6259.986.18369forward
CNT30114657Camelina sativaEutrema salsugineum44.4438.6286.31168forward

Expression of CNT30309608

Peptides detected in this lncRNA

>peptide 1 (35 aa)
RRSPVILPDLSGTNTSFFPGFLCVGARRKNPKFCG*

Sequence

>CNT30309608
CCGACGTTCACCGGTGATTCTTCCTGACCTTTCTGGTACAAATACCTCGTTCTTTCCCGGATTTCTTTGCGTCGGAGCTCGTAGAAAGAATCCAAAGTTT
TGCGGCTAAGAAGCTTGAGAACACAAACCTTTCTAAGAATTCTCCATTCGGCTCCGTATGGTAACCAAACAAGGTCGAGACCGCCATAAGTAAGGGTTCG
GGCCGTGAGAGGGACGTCATGGTTTGAGAAATTGATGTCCTGGTCTTTCAAGATCTCTCGAGCTAGTGCTGGAGTGTTGACCACGACGGTTAGTTTTGAA
CCAAGATTGAGTTTGTAGATTGGACCGTGACTTTGAGCAAGGTTTGTGAAGTAGGTGTGAAGATTCGGGTCAAGAAAC