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Detailed information on CNT30305670


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-125

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-116

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30398794Triticum aestivumTriticum turgidum99.2598.15100796forward

Expression of CNT30305670

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MRHRTTTTKEPRLANPETEAPLPGAYWPPRSRSTK*

>peptide 2 (39 aa)
KCIRRSRTSTPGKNNRIIDQIQGSLIHNLPYDRSFRSNR*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSRVMVLPVRVFTNICMPPRSLSTKWRVDSFWML*

>peptide 4 (73 aa)
MKGGLLLDVIISQGAAILKLLTSKDEALLVWWDALLVLDLRLHIVDRVRRLNLQSDGLAREGLHKDLHATLEP*

>peptide 5 (61 aa)
MRRCWSGGMPSLSWIFAFTLSIVSEDSTSRVMVLPVRVFTKICMPPWSLSTRWRVDSFWML*

Sequence

>CNT30305670
CAAATGCATCAGAAGAAGCCGCACTTCAACACCAGGCAAGAACAACAGAATTATAGACCAAATTCAGGGCTCACTTATTCATAACCTGCCGTACGACAGA
AGTTTCAGATCCAACCGATAACAGTGCATCACAGTTCTGTAGAAACAAAGACACCATCAACAGACCCAGATGAGACACCGGACAACTACAACGAAGGAAC
CAAGGCTTGCGAACCCAGAAACAGAAGCACCATTGCCAGGAGCTTACTGGCCACCACGGAGCCGGAGCACCAAATGAAGGGTGGACTCCTTCTGGATGTT
ATAATCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC
ACATTGTCGATCGTGTCCGAAGACTCAACCTCCAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATTTGCATGCCACCCTGGAGCCTTAGCACCA
GGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAAT
GCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAATATC
TGCATGCCACCACGGAGCCTGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAA
AG