Detailed information on CNT30398794


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-124

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-115

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672296Triticum turgidumSetaria viridis67.8267.7390.55550forward
CNT30305670Triticum turgidumTriticum aestivum98.1599.25100796forward
CNT30242486Triticum turgidumAvena sativa68.1953.6491.5553forward
CNT30142093Triticum turgidumLolium perenne68.1957.8591.86553forward
CNT30148670Triticum turgidumBrachypodium distachyon68.1958.3391.5553forward
CNT30583334Triticum turgidumEchinochloa crusgalli68.1925.7289.69553forward

Expression of CNT30398794

Peptides detected in this lncRNA

>peptide 1 (32 aa)
ERKAHQMHQKKPHFNTRQEQQNYRPNSGLTYS*

>peptide 2 (35 aa)
MRHRTTTTKEPRLANPETEAPLPGAYWPPRSRSTK*

>peptide 3 (44 aa)
REKHIKCIRRSRTSTPGKNNRIIDQIQGSLIHNLPYDRSFRSNR*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSRVMVLPVRVFTNICMPPRSLSTKWRVDSFWML*

>peptide 5 (61 aa)
MRRCWSGGMPSLSWIFAFTLSIVSEDSTSRVMVLPVRVFTKICMPPWSLSTRWRVDSFWML*

>peptide 6 (73 aa)
MKGGLLLDVIISQGAAILKLLTSKDEALLVWWDALLVLDLRLHIVDRVRRLNLQSDGLAREGLHKDLHATLEP*

Sequence

>CNT30398794
GAGAGAAAAGCACATCAAATGCATCAGAAGAAGCCGCACTTCAACACCAGGCAAGAACAACAGAATTATAGACCAAATTCAGGGCTCACTTATTCATAAC
CTGCCGTACGACAGAAGTTTCAGATCCAACCGATAACAGTGCATCACAGTTCTGTAGAAACAAAGACACCATCAACAGACCCAGATGAGACACCGGACAA
CTACAACGAAGGAACCAAGGCTTGCGAACCCAGAAACAGAAGCACCATTGCCAGGAGCTTACTGGCCACCACGGAGCCGGAGCACCAAATGAAGGGTGGA
CTCCTTCTGGATGTTATAATCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCC
TGGATCTTCGCCTTCACATTGTCGATCGTGTCCGAAGACTCAACCTCCAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATTTGCATGCCACCCT
GGAGCCTTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTG
CTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGG
GTCTTCACAAATATCTGCATGCCACCACGGAGCCTGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCGA
GCTGCTTGCCG