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Detailed information on CNT30304367


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 1e-43

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-15

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30496070Triticum aestivumDigitaria exilis41.5745.194.2207forward

Expression of CNT30304367

Peptides detected in this lncRNA

>peptide 1 (72 aa)
IQKLRTTAQKGNHKSTYSQTRTAKANEHRHITFKVDLFILHLTVQMYLQLFAPNHRTRWSIKPDTVHKRDNT*

>peptide 2 (42 aa)
ESKNYELQPRKAIINPHIARQELQRQMSTGTLRSKLTYSYST*

>peptide 3 (35 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPV

Sequence

>CNT30304367
GAATCCAAAAACTACGAACTACAGCCCAGAAAGGCAATCATAAATCCACATATAGCCAGACAAGAACTGCAAAGGCAAATGAGCACAGGCACATTACGTT
CAAAGTTGACTTATTCATACTCCACTTAACGGTACAGATGTACCTGCAACTGTTTGCACCAAACCACAGGACTCGATGGTCCATTAAACCAGACACAGTA
CACAAACGAGACAACACTTGAACAAAGGCGCACCCACAGGACGACACAGGGTACAGCAGCAGCAGCAGGTCGAAAGATAGGGCAATTACTGACCACCACG
GAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGC
TGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAG