Detailed information on CNT30289787


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180387Triticum aestivumSecale cereale15.5230.0884.41404forward

Expression of CNT30289787

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MPAKSCNNASAGTVLQYLDLLQKLPFFLQYLSGLSLIIQEPLLAFLQHEDKYRTKLKSILHSK*

>peptide 2 (62 aa)
MADNGSSGSAPPDYLDLCAVNMAIAAAGRTAQPLPSKAWSAACVPCGRPAYGRSSGLALAMA*

>peptide 3 (81 aa)
MCSKHRYGTMSKDAGATLMYQLATVMGIGTKKLEWITRVFNPGLDAMPVIGFQHLGVDLSGLFVLACPCVQYFPLIAKIKF*

>peptide 4 (64 aa)
MRAVRPSGLRPQLWAGAGHGLSRRAGTACYGIAGWTSDGREGRKGTHKALFVGALGHDKRLSLP*

>peptide 5 (50 aa)
MLCVANIAMEPCQKMQVLLSCTNWLQLWASEQRSLSGLPGCLILVWTPCQ*

>peptide 6 (48 aa)
MDLYPDSGLATQQFAAGACGLLVGNDSGHAAPPMFDMLDRLRCLTQGF*

>peptide 7 (50 aa)
MVGKVEKAPIRLCLWALWGMIRGCLYHEGELKVSLCMDVFLADFYFCALY*

>peptide 8 (50 aa)
MTRTLVKRVLATIQTHPNFCQSCRLPRINTKMIEHTSKTSNQRKFSSGEL*

>peptide 9 (44 aa)
KAQQESCPCSMIQEVGQGEENGMQKPTPEGRAFFQNLPNQRIAG*

>peptide 10 (44 aa)
MELNGFGSFLKTHCVVDLVRHIADMCGCSASDQILKRNNVLTNY*

>peptide 11 (41 aa)
MIRIYQAGAMPCQQRVATMHQREQYYSTWTCFKNYLFFCST*

>peptide 12 (38 aa)
ESSTGELSMFNDTGSGAGRGERNAKANSRRESLLPKSA*

Sequence

>CNT30289787
GGAAAGCTCAACAGGAGAGCTGTCCATGTTCAATGATACAGGAAGTGGGGCAGGGAGAGGAGAACGGAATGCAAAAGCCAACTCCCGAAGGGAGAGCCTT
CTTCCAAAATCTGCCTAACCAAAGAATAGCGGGATAAGCTCTGTATGAGCTGTTGATGGCTGACAATGGAAGCAGCGGTAGTGCGCCTCCCGACTACCTC
GACTTGTGTGCCGTGAATATGGCGATCGCGGCGGCGGGGAGAACGGCGCAACCGTTGCCTAGCAAAGCTTGGTCGGCTGCATGCGTGCCGTGCGGCCGTC
CGGCTTACGGCCGCAGCTCTGGGCTGGCGCTGGCCATGGCCTGAGCCGTCGCGCTGGCACGGCCTGCTACGGCATAGCTGGTTGGACAAGCGATGGTCGG
GAAGGTCGAAAAGGCACCCATAAGGCTTTGTTTGTGGGCGCTCTGGGGCATGATAAGAGGTTGTCTTTACCATGAGGGCGAGCTCAAAGTTAGCCTCTGC
ATGGACGTGTTTCTAGCAGATTTTTATTTTTGTGCGCTTTACTAGCTGTCTATTGCCTTTCAGTTCGCACGGTCCAATGCCTTCTTTCTAGTTATCTTAC
TTATTTGTATCTTACTTAGAGTCTGTTTAGGAGCTAAGTACTCCCTCCGTCAGGATACATCCCTTTTTATCCATTTTGATGACAAGTATTTCCGGACGAA
GGGAGTACTAGTTTTACCTTTTTACAAAAAGATTGGAAAGAATTCTGCAAGCCTCTAATATGCAAAGGTATGGAACCTAAAACTTAGATTTCAATCATTT
CCTTAGTGTACCTTACCTCTATTGGTGTACTGCGTCCATCAATTGTATTTTTCTTCGAAGATCAGAGCTCCAATAACAATTTCCGGTTACCTTATGCCTC
TTCACTGCTCTCTCTCTCTCTTGTCTTTCATTCATACTCCCTCCATTCCAAAATAAATGTTGTGGTTTTAGTTCAAATTGGTATTCCACCTCTTGCTTGC
TTCTAGTCCAAAGGTGAAATCCATAGTAATAGTTGGTTGTATTGTCAATATTTGAAAAAAAATCTTAAGTTGCCAAAAGTTGACAATAAAATTTGGTAGC
AAACCACTAGCCATCATTTGACATTTTTGGCAAAATATTGGCATGCCAACTTTTGACATCTAACCACTGGAAAAAAAAAATTGCGCTCTATAGCATCATT
GATAGCACGTTGTAGCGTTTTGAGCAATGTCTCTCCAAATAAACTAGTGTACAAAAGTATCTCGCTAATAGCGCATTTTAAGAGTGGCGCTATTTTGCTA
TTGCAGATCATTGGGAAAGGGGTTTTGGTGAACAAATATAGACTATTTTTTTTGTCATGACCAGAACATTGGTGAAGAGGGTTTTGGCCACCATCCAAAC
ACACCCTAACTTCTGCCAATCATGCCGGTTACCTAGGATCAACACAAAGATGATCGAGCATACCAGTAAAACTAGCAATCAACGTAAATTTAGCTCAGGT
GAACTCTAGACGATACACATGGACCTCTATCCGGACTCAGGGTTGGCCACCCAACAATTTGCGGCAGGAGCCTGTGGCTTGCTGGTTGGCAACGACAGTG
GCCACGCAGCACCCCCAATGTTTGATATGTTGGATCGCCTTAGGTGTCTCACTCAGGGGTTTTAGTTTGCAGCTATCTCACAGGCCTTCGGGCCACAGCG
TGCCCACCGTTCATGGAGTTGAATGGCTTCGGAAGTTTTCTCAAGACGCATTGCGTTGTAGATCTAGTTAGGCACATCGCCGATATGTGTGGGTGTTCTG
CATCTGATCAAATACTAAAGAGAAACAATGTTTTGACAAATTATTAAGCCAAGTGGGCTTTTTTGTTCATCTGCTATTTACTTTTCTGGCGTACAGGTTC
ACATAAATCTGAGATGATAAGGATTTATCAGGCAGGAGCCATGCCATGCCAGCAAAGAGTTGCAACAATGCATCAGCGGGAACAGTATTACAGTACTTGG
ACTTGCTTCAAAAATTACCTTTTTTTTTGCAGTACTTGAGCGGCCTCAGTTTGATAATACAAGAACCGTTGTTAGCATTTCTACAACATGAAGACAAGTA
CCGCACCAAACTAAAATCTATACTTCATTCAAAATAAATAAGGATGGCTATGATGGACCAGGAGGCAGAGTTCAGAGAATCTGGTGGATAGTAGTTATTG
TTTGCTCCTAGTTACTGTAATATCGATGTTATGTGTAGCAAACATCGCTATGGAACCATGTCAAAAGATGCAGGTGCTACTCTCATGTACCAATTGGCTA
CAGTTATGGGCATCGGAACAAAGAAGCTTGAGTGGATTACCAGGGTGTTTAATCCTGGTTTGGACGCCATGCCAGTGATAGGCTTTCAGCATTTAGGAGT
GGACTTGTCTGGCCTGTTTGTCTTAGCTTGTCCATGTGTTCAATATTTCCCTCTTATTGCAAAGATCAAGTTTTAATCTTCTTGTAATAAGGTTGGCTAT
ATGCATCATACAATAGAGTCCGGGGTAATAAAAGCTTCCATTAGAAAAATATGAATAAAGCAGTGTTATGTATTCCAAACTACGTGCGAATGTTAATCAA
CAA