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Detailed information on CNT30284830


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT000851, E-value = 2e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30719996Triticum aestivumTriticum spelta75.4880.82100514reverse complement

Expression of CNT30284830

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGDKLHRREGNSPDHQLRPLSGGAKTARRFA*

>peptide 2 (32 aa)
MSKCIGRGAFRLRGKQPRKRGSTKRKRECRLE*

>peptide 3 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSNRESGGRRSESENVGLSNENIGENPMPRKPKVSSARFVHGG*

Sequence

>CNT30284830
AGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCAAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGT
CGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTTAAAGAGTGCG
TAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTCAAAATGCATCGGTAGGGGAGCGTTC
CGCCTTAGAGGGAAGCAACCGCGAAAGCGGGGGTCGACGAAGCGAAAGCGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGA
AAACCCAAGGTTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCAATGGACAACAGGTCAATATTCCT
GTACTACCCCTTGTTGGTACGGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATAGGTTTAAGGACACAAGGTGACCCTGCTTTTTCAGGGTAA
GAAGGGGTAGAGAAAATGCCTCGAGCCGAGGTCCGAGTACCAAGCGCTGCAGCGCTGAAGTATGAGCCCTGTGGACTAGCG