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Detailed information on CNT30719996

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30712450	Triticum spelta	Glycine max	43.08	96.48	89.05	274	reverse complement
CNT30284830	Triticum spelta	Triticum aestivum	80.82	75.48	100	514	reverse complement
CNT30604668	Triticum spelta	Oryza punctata	67.3	97.49	96.26	428	reverse complement

Expression of CNT30719996

SRR9114152: 0.17 RPKM

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MTSGSYFSAAALGTRTSARGIFSTPSYPEKAGSPCVLKPITIFRLT*

>peptide 2 (34 aa)
MFSLLKPTFSLSLRRPPLSRLLPSKAERSPTDAF*

>peptide 3 (65 aa)
FLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYDIRLILQRCSAWYSDLGSRHFLYPFLP*

Sequence

>CNT30719996
GTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGC
TTTTCCTGGGAGTATGACATCAGGCTCATACTTCAGCGCTGCAGCGCTTGGTACTCGGACCTCGGCTCGAGGCATTTTCTCTACCCCTTCTTACCCTGAA
AAAGCAGGGTCACCTTGTGTCCTTAAACCTATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCCGTACCAACAAGGGGTAGTACAGGAATATTG
ACCTGTTGTCCATTGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGGAGGAAACCTTGGGTTTTCGGGGCATT
GGATTCTCACCAATGTTTTCGTTACTCAAGCCGACATTCTCGCTTTCGCTTCGTCGACCCCCGCTTTCGCGGTTGCTTCCCTCTAAGGCGGAACGCTCCC
CTACCGATGCATTTTGACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCAGCGCAAGGGCGCTCGATCAGTGAGCTATTACGCACTCTTT
AAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGT