Detailed information on CNT30283728


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383754Triticum aestivumTriticum turgidum59.47100.1699.621859forward
CNT30682580Triticum aestivumTriticum urartu86.3172.8897.592698forward

Expression of CNT30283728

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKILAYTVPNISFKIAGVEFSPILLYGKP*

>peptide 2 (36 aa)
MHEVSCSFYLEIISIYSTVLIVKRHFSPDTVRWSLW*

>peptide 3 (36 aa)
MLNLFLHNQTLTIREMNVQYAKFGYPIAKELDYYLH*

>peptide 4 (35 aa)
MDFRSRPQASRSTNDSLKVIQQSKVMSTQLAGQYQ*

>peptide 5 (33 aa)
MHAACATNLLLWTKNNHQLAESTDTLWEGEQAY*

>peptide 6 (71 aa)
PQSSTQSLARLVRSKAAVSAGSGPTREEEFGERELEVAAILADLSSIVRASSRSRRGRRSPRGAGAGRGRP*

>peptide 7 (55 aa)
MESHDLHTDDARGNKLDSQLWFSGIFTNKYYPGTDRLLVLYKYTCSAFPCAGLNI*

>peptide 8 (44 aa)
MSSVMLSWAVHTIHRQKNSTVHCFFTCMQHVQQICYYGLKTITN*

>peptide 9 (40 aa)
MCSMLNLGIQLQKNWIIIYIRSQVITMYFKLIAHGPLNWP*

>peptide 10 (32 aa)
AELHPIPRSLGEIQGGRVGWERTHAGGGVRRA*

>peptide 11 (32 aa)
MIFRERACVLYFYVHEVFCLGQAQIMKIKHYL*

>peptide 12 (87 aa)
MWRLDLCSNKAMTFNFVVNLTAVLIVPIDRLIRANLVSCELEHPIFHDYIKSFLFFMIILRTHRSPSQPHLTCTSSRFKRALLLHPS*

Sequence

>CNT30283728
CCGCAGAGCTCCACCCAATCCCTCGCTCGCTTGGTGAGATCCAAGGCGGCCGTGTCGGCTGGGAGCGGACCCACGCGGGAGGAGGAGTTCGGCGAGCGTG
AGCTGGAGGTGGCAGCCATTCTCGCGGACCTGTCGTCCATCGTGCGGGCCAGCAGCAGGAGCAGGCGCGGCCGGAGATCCCCTCGTGGAGCCGGCGCCGG
CCGAGGAAGGCCCTAGCGGCTCCGCCGGCCAAGAAGCCCGCGGCCGATAGCCCGGACACCCCGCTCGCCTTCCTCGACGACGACGAGGCGGCGGCAGCGC
AGGACAAGTCGGCGCAGGAGCAGCGCGGCGATTTTGACGAGTAGGAGATGGAGCGCGTCACAAGCACCTTGGCTGCACCCTGAGGTTATCCATCAGGCAG
ACTGTCATCGCACTGTCGTTCACGATGCTGCTCCCAAGCCTCCTGACGAGATTGACTCTTTCACAAATCATGTCAACGATACTAGCAATTTGAAGAGGCT
GCTGCACATGATATGAAGATATTGGCATATACAGTCCCAAACATAAGTTTCAAAATAGCAGGTGTGGAGTTTAGCCCTATTCTGCTGTATGGAAAGCCAT
GACCTCCACACAGATGATGCAAGAGGAAACAAGCTAGACTCACAACTTTGGTTTTCAGGCATCTTCACCAACAAATATTACCCTGGTACTGACAGGTTGT
TAGTATTATATAAGTATACTTGTTCAGCCTTTCCATGTGCTGGTCTGAATATCTAAACAAGGAAGCAGGCTCAGTTGCTCACCAACCTACTATTGCTGCC
AACAAGTAGCCAGAAGCCCATAGAAGACATTTGCATTGATCACAGAAAAATGAAGTATTGAATTTGTAGGACATTGTCATCCTAATCTGGTTCCCACATA
TTCAAGATGTGGAGATTAGATCTTTGCTCCAACAAAGCCATGACCTTCAATTTTGTTGTTAATTTAACAGCTGTTTTGATTGTGCCGATCGATCGGCTTA
TAAGAGCCAATTTGGTTTCTTGTGAACTAGAGCATCCTATTTTTCATGATTATATTAAGAGCTTCCTATTTTTCATGATTATATTAAGAACTCACAGATC
TCCTTCACAGCCACACCTAACCTGCACATCATCTAGATTCAAGAGAGCCCTACTACTGCATCCATCCTAAAATCAATGTAAAAACAAGGGAAGTTCTAAC
CCGATATCTCCGTCTCCTATGAACAAATTTTAAGCCCGATTGATGGCAAGTGCATTGCATGTGTAAGTAATCTGGGTTGAACGTACTTGAGGTCTTCCAT
CACTTTTATTACTTGAATAGAAATTGTGCACATTGCACGAACTACCCATTAATGGGCAGCTGATATATATGATGCTTGGTTCATAATAGCTACTTCAGGT
TATCCCTTCTGCTATATTTTTCGTACTCCCTACTTTTGCGAGATCTGAACTGGTAGAGAAAACAGACCGGGATATTCGGTTCCTACCTAGAGATGCAGTG
AGGACTTACTGTATTGATTAGTCATTTGAAGAGTTAACTAGAAAGCATTTAGTATGTCTTCAGTTATGTTGTCGTGGGCTGTGCACACGATTCACAGACA
AAAAAACAGCACCGTGCATTGTTTTTTTACATGCATGCAGCATGTGCAACAAATTTGCTACTATGGACTAAAAACAATCACCAACTAGCTGAATCAACGG
ACACTCTATGGGAAGGAGAACAAGCATACTAAATAACGCGAAGCAGAGTAATTCCAAGATATTTTGAGAATTCATTGCAGTGGACTGTTGTGATTCGATT
TTTCTTAACCTTGATAATATTGTCTTGGATTTGAAATGATGGTATACATTTATTCTTCTTCTTTTGTATAGTTGTGAAGACCAAACTTAGAAAATTGTAC
CGGTTGTGATTTCAATCGAGTTTGAGGCTTCTGTCAAATATAATTATGTTCCCTGCTGATTATAATTTTGTTCACGTAGATGCATGAAGTTTCTTGTTCG
TTTTATTTGGAAATAATCTCGATTTATTCTACCGTCTTGATCGTAAAGCGACATTTTTCTCCTGACACTGTTCGCTGGTCACTATGGTGAACCGAACAGC
AAATCATGGACTTTAGATCCCGACCGCAGGCCTCACGGAGCACCAACGATAGCCTCAAGGTGATTCAGCAGAGCAAGGTGATGAGTACTCAGCTGGCTGG
TCAATATCAATGATCTTATCGGCCGGCAAAGCGGAGACGGACGACCACGGTCCCGACCTTGCCAGCAGGTGGAGACAATAAATGGGATCAAGGGAAGTTG
GTCGGGCTCCAGCGGCACATGCTTACCACTGCTGACTGTTGCCGGGAAAGGTATGTTGGTTTGATTCTTTCAAGATCCCAAACTAAAACAAGTCACCTGT
GACATTTGAATGATGCAAAGGTTTATTGTCTCTTCCCAAGAAATTGTGTGCAGAGAGCCTTGATTTTACATGCTGAACCTATTTTTGCATAATCAAACAC
TGACGATAAGAGAGATGAATGTGCAGTATGCTAAATTTGGGTATCCAATTGCAAAAGAATTGGATTATTATTTACATTAGAAGCCAGGTTATCACTATGT
ATTTTAAATTGATCGCTCATGGACCGCTCAATTGGCCATAAACACAACATAATTCGATCCCTCCCTTCAAATTGGCAACTAAAGGGAAGGTGAGTTAAAA
TGTCTCTGCCCCTGTGACCTGGCTGGTTATGTTTATATTACATCCAATATTATGTGTACTCATTTGATCTAAGGTTATTTTTAGTAACTTGTTTTTTTTT
TGTCACGAACAAATCGATGAACCAGCGGTTCAACCGGTGACAGACGCAACGGTTCAGTTGCCCGTTCGGTTTTAAAAAATATAGTCCGATGGCCATGGTG
GAAGAACACGACATGAAGGACGAGGAGACATGAGCATCCGGTGGCAGTGCTTCGCACTTTGAGCAGTAGGGATACTTGATCATAGGGAAAGGGAAGGGAG
ATGAGTTCGTGCTTGCATGATTTTTAGGGAAAGAGCGTGTGTATTGTACTTCTATGTGCATGAAGTGTTTTGTTTGGGCCAAGCCCAAATAATGAAAATA
AAACACTATCTCTAAAACTATTCAAA