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Detailed information on CNT30383754


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523685Triticum turgidumSetaria italica4.221.6788.4678reverse complement
CNT30283728Triticum turgidumTriticum aestivum100.1659.4799.621859forward
CNT30682580Triticum turgidumTriticum urartu101.2950.7897.391880forward

Expression of CNT30383754

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MHAACATNLLLWTKNNHQLAESTDTLWEGEQAY*

>peptide 2 (35 aa)
MDFRSRPQASRSTNDSLKVIQQSKVMSTQLAGQYQ*

>peptide 3 (36 aa)
MLNLFLHNQTLTIREMNVQYAKFGYPIAKELDYYLH*

>peptide 4 (36 aa)
MHEVSCSFYLEIISIYSTVLIVKRHFSPDTVRWSLW*

>peptide 5 (44 aa)
MSSVMLSWAVHTIHRQKNSTVHCFFTCMQHVQQICYYGLKTITN*

>peptide 6 (40 aa)
MCSMLNLGIQLQKNWIIIYIRSQVITMYFKLIAHGPLNWP*

Sequence

>CNT30383754
CAAATTTTAAGCCCGATTGATGGCAAGTGCATTGCATGTGTAAGTAATCTGGGTTGAACGTACTTGAGGTCTTCCATCACTTTTATTACTTGAATAGAAA
TTGTGCACATTGCACGAACTACCCATTAATGGGCAGCTGATATATATGATGCTTGGTTCATAATAGCTACTTCAGGTTATCCCTTCTGCTATATTTTTCG
TACTCCCTACTTTTGCGAGATCTGAACTGGTAGAGAAAACAGACCGGGATATTCGGTTCCTACCTAGAGATGCAGTGAGGACTTACTGTATTGATTAGTC
ATTTGAAGAGTTAACTAGAAAGCATTTAGTATGTCTTCAGTTATGTTGTCGTGGGCTGTGCACACGATTCACAGACAAAAAAACAGCACCGTGCATTGTT
TTTTTACATGCATGCAGCATGTGCAACAAATTTGCTACTATGGACTAAAAACAATCACCAACTAGCTGAATCAACGGACACTCTATGGGAAGGAGAACAA
GCATACTAAATAACGCGAAGCAGAGTAATTCCAAGATATTTTGAGAATTCATTGCAGTGGACTGTTGTGATTCGATTTTTCTTAACCTTGATAATATTGT
CTTGGATTTGAAATGATGGTATACATTTATTCTTCTTCTTTTGTATAGTTGTGAAGACCAAACTTAGAAAATTGTACCGGTTGTGATTTCAATCGAGTTT
GAGGCTTCTGTCAAATATAATTATGTTCCCTGCTGATTATAATTTTGTTCACGTAGATGCATGAAGTTTCTTGTTCGTTTTATTTGGAAATAATCTCGAT
TTATTCTACCGTCTTGATCGTAAAGCGACATTTTTCTCCTGACACTGTTCGCTGGTCACTATGGTGAACCGAACAGCAAATCATGGACTTTAGATCCCGA
CCGCAGGCCTCACGGAGCACCAACGATAGCCTCAAGGTGATTCAGCAGAGCAAGGTGATGAGTACTCAGCTGGCTGGTCAATATCAATGATCTTATCGGC
CGGCAAAGCGGAGACGGACGACCACGGTCCCGACCTTGCCAGCAGGAGACAATAAATGGGATCAAGGGAAGTTGGTCGGGCTCCAGCGGCACATGCTTAC
CACTGCTGACTGTTGCCGGGAAAGGTATGTTGGTTTGATTCTTTCAAGATCCCAAACTAAAACAAGTCACCTGTGACATTTGAATGATGCAAAGGTTTAT
TGTCTCTTCCCAAGAAATTGTGTGCAGAGAAGCTGCCTTGATTTTACATGCTGAACCTATTTTTGCATAATCAAACACTGACGATAAGAGAGATGAATGT
GCAGTATGCTAAATTTGGGTATCCAATTGCAAAAGAATTGGATTATTATTTACATTAGAAGCCAGGTTATCACTATGTATTTTAAATTGATCGCTCATGG
ACCGCTCAATTGGCCATAAACACAACATAATTCGATCCCTCCCTTCAAATTGGCAACTAAAGGGAAGGTGAGTTAAAATGTCTCTGCCCCTGTGACCTGG
CTGGTTATGTTTATATTACATCCAATATTATGTGTACTCATTTGATCTAAGGTTATTTTTAGTAACTTGTTTTTTTTTTGTCACGAACAAATCGATGAAC
CAGCGGTTCAACCGGTGACAGACGCAACGGTTCAGTTGCCCGTTCGGTTTTAAAAAATATAGTCCGATGGCCATGGTGGAAGAACACGACATGAAGGACG
AGGAGACATGAGCATCCGGTGGCAGTGCTTCGCACTTTGAGCAGTAGGGATACTTGATCATAGGGAAAGGGAAGGGAGATGAGTTCGTGCTTGCATGATT
TTTAGGGAAAGAGCGTGTGTATTGTACTTCTATGTGCATGAAGTGTTTTGTTTGGG