Detailed information on CNT30269247


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 1e-27

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30668234Chenopodium quinoaTriticum dicoccoides27.0313.6191.2580forward

Expression of CNT30269247

Peptides detected in this lncRNA

>peptide 1 (55 aa)
VRRRGGAVGWRRGAVGWRRGAVGWRRGAVAWRRGAVARRCGAVAWRCGAVRWAGG*

>peptide 2 (36 aa)
TTERWGCRLETWGCRLETWGCRLETWGCSLETWGCS*

Sequence

>CNT30269247
GTACGACGGAGAGGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGCTTGGAGACGTG
GGGCTGTAGCTAGGAGATGTGGGGCTGTAGCTTGGAGATGTGGGGCTGTAAGATGGGCTGGTGGGTGAATATGCTGGGCTTGTAGGACTATAGCCAGGAG
ACCCAGGACTGTAAGTCGGGGAAGTAGGGCTATATCCAGGAGAGGTTGGACTATATCCTGGAGAAGTTGGGCTATATCCAGGAGAAGTTGGGCTAT