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Detailed information on CNT30269200


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 9e-102

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30235067Chenopodium quinoaBrassica oleracea36.5138.3182.35272forward

Expression of CNT30269200

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MQLISSDVTIFQQCVTLEAHKIRILNIHSTIKTHVH*

>peptide 2 (34 aa)
MCHIRSTQNSHFEHSFNNQNTCTLKHTKLKLLHL*

>peptide 3 (75 aa)
MAHLQWITSSSRFLAKVSGSAERPAVYDGASPENGPKYLTRSGPYHGLPDETFLGFPAVFLMVILPPPRMFSEAEL

Sequence

>CNT30269200
AAAATTCTGATTGACTACAAATAATAAACAGACTATGCAGTTGATTTCAAGCGATGTCACAATATTTCAACAATGTGTCACATTAGAAGCACACAAAATT
CGCATTTTGAACATTCATTCAACAATCAAAACACATGTACATTGAAGCATACAAAGCTCAAATTGTTACACCTTTGATTCATTTGCACTAAATTCATACT
AAATTACTTCACTTGCCGGGAACGAAGTTGGTGGCGTAGGACCAAGCATTGTTGTTAACCGGGTCGGAAAGTGGGTCGACTACTTCACCAAGTGGACCAC
CGGCAACACGGTAACCCTCAACGGCACCCATCAAGATAACTTGGCAGGCCCAAATAGCCAAAATACTTTGGGCATGGATCAAACTTGGGTTACCCAAGTA
GTCAAGCCCGCCCTCACTAAAGATTTGTGACCCAGCCTTGAACCAAACGGCCTCGCCGAACTTAACTCCGTTACGGGCCAAGAGCTCGGGGAAAACACAG
CCCAAAGCACCCAACATGGCCCATCTGCAGTGGATCACCTCAAGCTCACGGTTCTTAGCAAAGGTCTCTGGGTCAGCGGAAAGGCCCGCTGTGTATGATG
GGGCCTCACCAGAGAATGGGCCCAAATACTTAACACGGTCTGGGCCGTACCATGGGCTTCCTGATGAAACATTTTTGGGCTTTCCTGCAGTTTTCCTCAT
GGTGATCCTTCCCCCACCTAGGATGTTTTCAGAGGCGGAGCTAAG