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Detailed information on CNT30269188


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 2e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548768Chenopodium quinoaIpomoea triloba23.5257.6887.38214forward
CNT30513343Chenopodium quinoaJuglans regia44.7367.6181.33407forward

Expression of CNT30269188

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MCHIRSTQNSHFEHSFNNQNTCTLKHTKLKLLHL*

>peptide 2 (36 aa)
MQLISSDVTIFQQCVTLEAHKIRILNIHSTIKTHVH*

>peptide 3 (40 aa)
MVILPPPRMFSEAELSLTACPAKEGEESAIVEEAIVKRAS*

>peptide 4 (45 aa)
MAQSTQHGPSAVDHLKLTVLSKGLWVSGKARCVPTIVSRKFTSEV*

>peptide 5 (29 aa)
MAHLQWITSSSRFLAKVSGSAERPAVSQP*

Sequence

>CNT30269188
GTTATGGTACATATGTAATTTATTTATTTATTCATATTTGGTTTTCTAGATTATAATCATAAAAATTCTGATTGACTACAAATAATAAACAGACTATGCA
GTTGATTTCAAGCGATGTCACAATATTTCAACAATGTGTCACATTAGAAGCACACAAAATTCGCATTTTGAACATTCATTCAACAATCAAAACACATGTA
CATTGAAGCATACAAAGCTCAAATTGTTACACCTTTGATTCATTTGCACTAAATTCATACTAAATTACTTCACTTGCCGGGAACGAAGTTGGTGGCGTAG
GACCAAGCATTGTTGTTAACCGGGTCGGAAAGGTGGTCAGCAAGGTTCTCCAATGGGCCCTTTCCGGTAACAATAGCTTGAACAAAGAATCCGAACATAG
AGAACATAGCCAACCTACCATTCTTAATCTCCTTAACCTTCAACTCGGCGAAGGCCTCTGGGTCATCAGCCAAGCCCAATGGCCCAAAGCACCCAACATG
GCCCATCTGCAGTGGATCACCTCAAGCTCACGGTTCTTAGCAAAGGTCTCTGGGTCAGCGGAAAGGCCCGCTGTGTCCCAACCATAGTCTCCAGGAAATT
CACCAGTGAGGTATGATGGGGCCTCACCAGAGAATGGGCCCAAATACTTAACACGGTCTGGGCCGTACCATGGGCTTCCTGATGAAACATTTTTGGGCTT
TCCTGCAGTTTTCCTCATGGTGATCCTTCCCCCACCTAGGATGTTTTCAGAGGCGGAGCTAAGTTTAACTGCCTGCCCGGCCAAAGAAGGGGAAGAAAGT
GCCATTGTTGAGGAGGCCATTGTTAAGAGGGCGAGCTAAGAACTATAACAATTATGTAACAAGAATATTTTTTTTATGTTTGTTGAAGTGATGAAAATAA
ATGTAATAAT