Detailed information on CNT30513343


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 2e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640636Juglans regiaNymphaea colorata26.0827.586.62157forward
CNT30269188Juglans regiaChenopodium quinoa67.6144.7381.33407forward
CNT30542600Juglans regiaBrassica napus60.6351.4883.29365forward
CNT30234927Juglans regiaBrassica oleracea60.6345.483.29365forward
CNT30610069Juglans regiaGossypium raimondii33.0645.1288.94199forward
CNT30409978Juglans regiaPapaver somniferum34.3921.785.99207forward

Expression of CNT30513343

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLEWMTSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (52 aa)
MLTRPTPSSGVNGESFTALPAKDGDERAMVEAAIVEGESLITKLSFLFFFFCR

>peptide 3 (98 aa)
DKVSGISPSIVVHRVCKVVSQVLQGSLSCHNGLNKESKHREHSQSPVLKLLHLKLSKCFWVISKTQGFREDAPKGSEHGPPRVDDLELTVLGKGFWIS*

Sequence

>CNT30513343
GGACAAAGTTAGTGGCATAAGCCCAAGCATTGTTGTTCACAGGGTCTGCAAGGTGGTCAGCCAGGTTCTCCAAGGGTCCCTTTCCTGTCACAATGGCTTG
AACAAAGAATCCAAACATAGAGAACATAGCCAATCTCCCGTTCTTAAGCTCCTTCACCTTAAGCTCAGCAAATGCTTCTGGGTCATCAGCAAGACCCAAG
GGTTCCGGGAAGACGCACCCAAGGGCTCCGAGCATGGCCCACCTAGAGTGGATGACCTCGAGCTCACGGTTCTTGGCAAAGGTTTCTGGATCAGCTGAAA
GTCCAGCGGTGTCCCAGCCATAATCACCGGGGAATTCCCCAGTAAGGTAGGATGGAGGCTCTCCAGAGAATGGGCCCAAGTACTTAACACGGTCTGGACC
ATACCATGGGCTACCGGAAACGGTCTTGGTGGCAGTTTTCCTCATGCTGACACGACCAACGCCGAGCTCGGGGGTCAATGGAGAGAGTTTCACTGCCTTG
CCAGCGAAAGATGGGGATGAGAGAGCCATGGTTGAGGCGGCCATTGTTGAAGGAGAGAGCTTGATTACTAAACTTTCTTTTCTTTTCTTTTTTTTCTGTA
GG