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Detailed information on CNT3026898


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30175108Populus trichocarpaVigna angularis10.0122.587.572reverse complement

Expression of CNT3026898

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MFLLTFDNTVNKVMKSAKQSSPARQPVHRIQLTVSSTIYPHARHLLLKSFHSHAQHRGRFS

>peptide 2 (33 aa)
MLLGHATCFLLDESIIIFFLLLKLLTDRLGFFL*

>peptide 3 (31 aa)
AESKYSVEQVGVTVEFYDCELNEISYSDSVL*

Sequence

>CNT3026898
GCAGAATCAAAGTATAGTGTTGAACAAGTAGGTGTAACTGTTGAGTTCTATGATTGTGAACTAAATGAAATTAGTTATAGTGATTCTGTACTGTGAAAAA
AAATGATAGACGTCTTTTAGAATTTATCTCATAGAAGGAAGTAAATATTTTTAACTATTACAAGAACTAGACATTAAAGACGTCATAAAAAAAATAATTT
GAATCGAACACTCATAAAGTCTTCCAAGTTAGTTAAGCTTTGAATAGTATTGGACATCATGGAACCATCATGGTCAGTTGCAGTAGCAGTACTAAATATC
AATCATAATGCTTCTTGGTCATGCCACGTGTTTTCTTTTAGATGAATCAATTATCATTTTTTTTTTATTATTGAAATTATTAACAGATAGGCTGGGTTTT
TTTTTATGAGCTCTTCATCAATTTTCAGTCGATCCCAACGGTCCCTCGCAATTCATCCCTCAAAGACAGAATATTAAAAAAAATAAAAATAAAAATAAAT
TGAAAATTCCTGTCTTACGTCAGCCACCAGTAGAAATGTTCCTCTTGACATTTGACAACACAGTAAATAAGGTAATGAAAAGCGCCAAGCAATCATCACC
TGCCCGCCAACCTGTCCATCGCATCCAACTTACAGTTTCTTCTACAATTTACCCGCACGCGCGGCATCTCCTTTTAAAATCTTTCCACAGCCACGCACAG
CACAGAGGCCGCTTTTCCA