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Detailed information on CNT30267674


BLAST search results

BLAST vs Swiss-Prot:
sp|P02398|RK12_SPIOL, E-value = 2e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30405616Chenopodium quinoaBeta vulgaris38.5321.1481.75126forward

Expression of CNT30267674

Peptides detected in this lncRNA

>peptide 1 (44 aa)
SLRQQERHQQEHQGQQQQQQERTTQQKLLTYPEASRRGLWLPRA*

>peptide 2 (32 aa)
FSSTAGAASAGAPGAATAAAGANDAAETPNLS*

>peptide 3 (40 aa)
MGRRRVVSEGRLRVAIVVVAAIVGGREEEMRGLDMRIRRE*

Sequence

>CNT30267674
TTCTCTTCGACAGCAGGAGCGGCATCAGCAGGAGCACCAGGGGCAGCAACAGCAGCAGCAGGAGCGAACGACGCAGCAGAAACTCCTAACTTATCCTGAA
GCCAGTCGACGAGGACTCTGGCTTCCTCGAGCGTAAGGCCGGAGAGTTGAGTACCCAATTGCTCGATTTTCTCGGGTGCTTCGACAGCGGCAATGGGGCG
AAGACGGGTGGTGAGTGAAGGGAGGTTGAGGGTAGCCATTGTTGTTGTTGCCGCCATTGTTGGAGGGAGAGAAGAAGAGATGAGAGGATTAGATATGAGG
ATAAGGAGAGAGTGAGGAATGAGTGAG