Detailed information on CNT30257546


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7FNT0|PSBM_ATRBE, E-value = 7e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615871Avena sativaSesamum indicum20.5416.992.8684forward

Expression of CNT30257546

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MEVNILAFIATALFILVPTAFLLIIYVKTVSQND*

>peptide 2 (44 aa)
MQKGLNKKNPSYGSQYSRIYCYCTVHSSSYCFFTYYLCKNSQPK*

>peptide 3 (42 aa)
VKIKNKEVMEVNILAFIATALFILVPTAFLLIIYVKTVSQND*

Sequence

>CNT30257546
TGTGAAAATAAAAAATAAAGAGGTTATGGAAGTCAATATTCTCGCATTTATTGCTACTGCACTGTTCATTCTAGTTCCTACTGCTTTTTTACTTATTATT
TATGTAAAAACAGTCAGCCAAAATGATTAGTTGGAATTCCAATTAATCATTGAAGAAATGCAAAAGGGATTAAATAAAAAAAATCCAAGTTATGGAAGTC
AATATTCTCGCATTTATTGCTACTGCACTGTTCATTCTAGTTCCTACTGCTTTTTTACTTATTATTTATGTAAAAACAGTCAGCCAAAATGATTAGTTGG
AATTCCAATTAATCATTGAAGAAATGCAAAAGGGATTAAATAAAAAAAATCCAAGTCTTAAATGAAAGGATCTGGTTGGAATCTTAAAGTGTGGTAGAAA
GAACTACAT