Detailed information on CNT30255695


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189203Avena sativaSecale cereale6.2124.0884.76105forward
CNT30655746Avena sativaTriticum dicoccoides5.3840.2784.6291forward
CNT30680086Avena sativaTriticum urartu6.0936.0183.5103forward

Expression of CNT30255695

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGLYLCKLYGWSYLGFFLLRKAFNFVHYIV*

>peptide 2 (40 aa)
MFGHMFSAFYHSCLASGNLLPRLIILFSPSLALQLTFFYT*

>peptide 3 (44 aa)
MCLPRKEAHMEDLSLLRGKDMYHRLLRGKHMEDLSLIMLRLLLL*

>peptide 4 (49 aa)
MTARRAFLLRDYFTSMRSRAAAAGYGIRTDGTVCRSSSVVRAVARRRAT*

>peptide 5 (58 aa)
MLTMLLLWCRPDLLPLSALLSCCCCPCLLQLGLLRQHCVPHVLATEGSSHGRFESIER*

>peptide 6 (63 aa)
CAPNPNPKPVAPLLPLVLPSLAPPPVALWPKQLRTSSPHPHHRIPSFQIFSSPTAPPPDRRTI*

>peptide 7 (29 aa)
MSVSSTSITETNHSFALLIVLVKCTSKII*

>peptide 8 (36 aa)
MTEDQKKLGVLHHRFSCYSHHVLLLVYLFLIVGRWI*

>peptide 9 (43 aa)
MLQASAMPRGAAVCTGFRGDGIVDSHSMMSTHRNTSSASRTAC*

Sequence

>CNT30255695
TGCGCCCCTAACCCTAACCCTAAGCCAGTTGCGCCCCTTCTTCCCCTCGTCCTCCCCAGCCTTGCGCCACCGCCCGTAGCCCTATGGCCTAAGCAGCTGC
GCACCTCTTCCCCTCATCCCCACCATCGAATCCCCTCGTTCCAGATCTTCTCCTCTCCGACAGCACCACCCCCAGATCGGCGCACCATATGACGGCACGG
CGGGCTTTCCTCCTCCGCGACTACTTCACCAGCATGAGGTCACGCGCGGCCGCTGCTGGATACGGGATCCGGACCGACGGAACTGTCTGTCGTTCCTCGT
CGGTCGTGCGTGCGGTGGCGCGGAGACGAGCAACCTAGTTCAAATGCAGGGGCTTGGAGGATAGCGCGATGCTCCAGGCGTCGGCGATGCCGCGAGGAGC
TGCGGTCTGCACGGGGTTTCGTGGTGATGGCATCGTTGACTCCCATTCCATGATGTCAACACACAGGAACACCTCTTCTGCCAGCCGAACTGCCTGCTAG
ATAAACACTTGTAATTCATTCTACTGCTATCAATTCGAGCCAAATTCTCCAACCAGGGGCAGTCAGCATGTTATATGTCCGTAAGTAGTACTTCTATAAC
AGAAACTAATCATTCTTTTGCACTACTAATTGTTCTTGTTAAATGCACCAGTAAAATTATATAAGAACTGGTATCAATCAGAAGTGTTTAGACCATATAT
AGTTCTATTCCACCAGTATAATCATGTCTCTCGTGTGATTTTTGATTGATATTAGAACCAGCATGCTAGTAGACATTCAACCATGAATATAAATGTTTGG
TCACATGTTTTCAGCATTCTACCACTCTTGCTTGGCATCTGGTAATTTACTACCTAGATTAATTATCTTGTTTTCACCATCTCTTGCTTTACAGCTCACG
TTCTTTTACACGTAAGCACTAGCATTAAGATTTCTTACGCCAAAAACTTGATTGAATCCTTAACTCCTTCGTGCAGCTATGTGCCATCATATCAACATTT
CACATCTTAATTAATTTATATTATAATAATAATAATGCCATCATTTGCTTAAAGTTTGCATTTTTATTGATGAGTCTGTTCTAACTACCGTTTTGCATTT
ATGTTGACCATGTTACTGCTGTGGTGTCGACCGGATCTCTTGCCACTGTCTGCATTGCTGAGTTGCTGCTGCTGTCCCTGTCTTCTTCAACTAGGACTTC
TCCGACAACACTGTGTCCCCCATGTGCTTGCCACGGAAGGAAGCTCACATGGAAGATTTGAGTCTATTGAGAGGTAAAGACATGTACCACCGTTTGTTGA
GAGGTAAACACATGGAAGATTTGAGTCTAATTATGTTGAGGTTGTTGCTGCTATGACAGAAGATCAGAAGAAGCTTGGAGTTTTGCACCACCGTTTTAGT
TGCTATAGCCACCATGTTTTGTTGCTCGTGTATCTATTCTTGATTGTAGGCCGTTGGATCTAAACTGTGATTATACTTGTTTCTGCTCTTTCACTGCATG
GGCTTGTATCTCTGTAAATTATATGGCTGGTCTTATTTGGGTTTCTTTCTCTTAAGAAAGGCATTCAACTTTGTACATTATATTGTTTGAAATATTTCTG
GGCTTATATGGCTGTACTTTCCTTTTGCAAAGGCCTTTGGCCTCTGCATCTTCGTTAAGTAGTATAAACGGAGTGTAAAAGTTGATCGGC