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Detailed information on CNT30189203


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30255695Secale cerealeAvena sativa24.086.2184.76105forward
CNT30655746Secale cerealeTriticum dicoccoides40.1477.4394.29175forward

Expression of CNT30189203

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLPPSFGACVSVFDCMCTCWTCKRVCALVSI*

>peptide 2 (29 aa)
MVWVTKWTTQTLSPTTKSSSSPAQVLSPS*

Sequence

>CNT30189203
AGACGATTTCCGTCAACAATAATGGTGTACTGCATGTATTGCCTGCAGTTTTGACACCAACCCCACTGTACTGACGCCTCCTGCCTCCTGTGCTGCTCCG
ATACAGCCCACTTGACGAGCCATGGTGTGGGTTACCAAGTGGACAACACAAACACTGTCACCTACGACAAAGTCGTCGTCATCGCCGGCACAGGTGCTTT
CACCGAGTTGATTCAGGAGATGCAAGTTGAAGGTGTACAGGATCTAATGTCGGCGAGGTTGCTGCTGTGACAGAAGATTAGACGAAGCTTGGAGATGTGC
GCCATAGTTTTAGTTGATGTTGCCACCAAGTTTTGGTGCTTGTGTATCTGTTTTTGATTGTATGTGCACTTGTTGGACGTGCAAACGTGTATGTGCTCTT
GTGAGTATTTGATTGGATGATTTCTGGATTTAATCA