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Detailed information on CNT30255226


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 4e-165

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30443381Avena sativaAegilops tauschii61.856.8290.18550forward

Expression of CNT30255226

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MYTPRNSFFKLLLAGYKVGGEGPRIVVDGVGEVVGKVLERTLTGDDGLHKEPKHGEHGEAAILELLHLELSERLRIIS*

>peptide 2 (43 aa)
MACTKNPNMENMARRPFLSSFTLSSANASGSSARPRGSKLPPG*

>peptide 3 (29 aa)
MAQREWMTSNSRFLAKVSGSAESPAVSHP*

>peptide 4 (32 aa)
MVMRPPPRTDEAPASFIAGEESAMVAAAIAIG*

Sequence

>CNT30255226
AGTAGACCTCAACTGCAAACGTCTCTGATAGATCACATCTTAATGGTACATCTAGAGTCTAGAGTACATGTATACTCCTAGGAACTCATTTTTTAAGTTA
TTACTTGCCGGGTACAAAGTTGGTGGCGAAGGCCCACGCATTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCAAGGTTCTCGAGCGGACCCTTACCGGTG
ACGATGGCTTGCACAAAGAACCCAAACATGGAGAACATGGCGAGGCGGCCATTCTTGAGCTCCTTCACCTTGAGCTCAGCGAACGCCTCAGGATCATCAG
CTAGACCAAGGGGGTCGAAGCTGCCACCGGGGTAGAGCGGGTCCACGATCTCTCCGAGTGGGCCACCGGCAACACGGTACCCCTCAACTGCGCCCATGAG
CACGACCTGGCAGGCCCAGATGGCGAGGATGCTCTGGGCATGGACAAGGCTGGGGTTGCCGAGGTAGTCTAGGCCACCCTCGCTGAAGATCTGGGAACCA
GCCTTGAACCAGACGGCCTCGCCAAACTTGACGCCGTTGCGGGCGAGCAGCTCGGGAAAGACACATCCGAGCGCGCCGAGCATGGCCCAACGGGAGTGGA
TGACCTCCAACTCACGGTTCTTGGCGAAGGTCTCTGGGTCGGCGGAGAGCCCGGCGGTGTCCCACCCATAGTCACCTGGGAACTCCCCGTTGAGGTAGAG
CACACGGTCGGGGCCATACCATGGACTGCTGGAGCCAGCCGCCTTGGCCGTGGCCTTGCGCATGGTGATGCGCCCGCCGCCCAGGACGGATGAGGCTCCG
GCGAGCTTCATAGCAGGGGAGGAGAGCGCCATGGTTGCCGCTGCCATTGCTATTGGATAGATGAGAGCAAGCTGCTGATGTGCTGCTGCT