Detailed information on CNT30253603


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 5e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30666113Avena sativaTriticum dicoccoides51.4346.5296.15234forward

Expression of CNT30253603

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKICI

>peptide 2 (54 aa)
FDTKFRVHLFIHHTIPSQVAAPQQKFVRDKVTPHFTTTRQELTQERTIQGHTGS*

Sequence

>CNT30253603
TTTGACACTAAGTTTAGGGTTCACTTATTCATTCATCACACAATTCCATCCCAAGTTGCTGCACCACAGCAGAAGTTTGTAAGAGACAAGGTAACACCAC
ACTTCACCACAACACGGCAGGAACTAACACAAGAGCGGACCATACAAGGACACACCGGCAGCTAAACTGGAGCACACAGAAGACAGCAGACTTGCAAACC
CAGAGACAGAAAAAGCTCCTCACTGGCCACCACGGAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCGTC
CTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGAC
TCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCT