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Detailed information on CNT30252824


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40034|EF1A2_HORVU, E-value = 8e-148

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721809Avena sativaTriticum spelta29.8818.7586.93283forward

Expression of CNT30252824

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MSRTAKRPRGGYWEKVSTTMGLVGIIFTKPASPFLRNLGKASISLPERLSTLVWISENLTAMWDVWQSSTGA*

>peptide 2 (93 aa)
MMMTWATKLAASLAGSSLALEATYPRLISFTATFFTLKPTLSPGTASSMDSWCISTDFTSVVNPVGPKVTSIPGLITPVSTRPTGTVPMPPIL*

Sequence

>CNT30252824
GGCATACCAGCAACAAATAATATGACTCGAAATTTCTGACGTATATATAGAGAGTAGCAACAATAATGTAACATAGCAGGACATTGTTTCACCAACATAA
CCGAAAGATAGAATGATAAGCAGCACGAAGGCTGGACGACGCACATAACCAAACTCCAGAGAACGGGCAAGTTCCCAGATTCACTAACACGACTACCATC
GCCATATACCACCACTACGGTTGTAGTAGTGGACAACCACCGGGCACCATCTCATTTCTTCTTGGCGGCAGCCTTGGTCACCTTGGCGCCAGTGGGGTCC
TTCTTCTCCACGCTCTTGATCACACCAACGGCGACAGTCTGCCTCATGTCACGCACAGCAAAGCGGCCAAGGGGAGGGTACTGGGAGAAGGTCTCCACCA
CCATGGGCTTGGTGGGAATCATCTTCACGAAGCCAGCATCACCGTTCTTGAGGAACTTGGGGAAGGCCTCAATCTCCTTGCCAGAACGCCTGTCAACCTT
GGTCTGGATCTCAGAGAACTTGACAGCAATGTGGGACGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCGATCTGGCCAGGGTGGTTCATGATGATG
ACCTGGGCAACGAAGTTGGCAGCCTCCTTGGCAGGGTCGTCCTTGGCATTGGAGGCGACATACCCACGCTTGATATCCTTCACAGCAACGTTCTTCACGT
TGAAGCCAACGTTGTCACCTGGCACAGCCTCCAGCATGGACTCGTGGTGCATCTCCACAGACTTCACCTCAGTGGTCAACCCAGTTGGGCCAAAGGTGAC
AAGCATACCAGGCTTGATCACTCCAGTCTCAACACGCCCCACTGGCACAGTTCCAATGCCACCAATCTTGTAGACATCCTGAAGGGGAAGGCGGAGGGGC
TTGTCTGAGGGTCTCTTGGGCTCGTTGATCTGGTCAAGCGCCTCAAG