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Detailed information on CNT30721809


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004692, E-value = 2e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672934Triticum speltaSetaria viridis16.7745.8394.07253forward
CNT30546688Triticum speltaIpomoea triloba15.9756.0589.21241forward
CNT30730167Triticum speltaCorchorus capsularis16.732.2390.48252forward
CNT30380125Triticum speltaManihot esculenta16.921.2791.76255forward
CNT30195181Triticum speltaPisum sativum17.154.4389.53258forward
CNT30712097Triticum speltaGlycine max17.0321.5485.99257forward
CNT3093993Triticum speltaSolanum tuberosum16.1746.7490.98244forward
CNT30288144Triticum speltaTriticum aestivum16.8368.6594.09254forward
CNT30224163Triticum speltaHordeum vulgare30.8269.395.27465forward
CNT30386294Triticum speltaTriticum turgidum16.8369.0294.09254forward
CNT30562819Triticum speltaActinidia chinensis16.8350.488.58254forward
CNT30146334Triticum speltaMedicago truncatula18.0327.3687.13272forward
CNT30440628Triticum speltaAegilops tauschii27.756.9596.65418forward
CNT30252824Triticum speltaAvena sativa18.7529.8886.93283forward
CNT30312075Triticum speltaCamelina sativa14.0537.7292.45212forward
CNT30611975Triticum speltaArabis alpina18.4920.982.8279forward
CNT30132437Triticum speltaLolium perenne18.9523.7987.06286forward
CNT30608684Triticum speltaGossypium raimondii16.8360.3389.76254forward
CNT3067093Triticum speltaLeersia perrieri13.1244.395.45198forward
CNT30646927Triticum speltaRosa chinensis16.6374.790.04251forward
CNT30684845Triticum speltaTriticum urartu51.6947.6298.33780forward
CNT30338600Triticum speltaEragrostis tef17.153.7592.64258forward
CNT30645139Triticum speltaCannabis sativa15.5785.1491.49235forward
CNT30120727Triticum speltaCitrus clementina15.9743.8291.7241forward
CNT30148140Triticum speltaBrachypodium distachyon13.855591.87209forward
CNT30726347Triticum speltaLupinus angustifolius16.552.289.96249forward

Expression of CNT30721809

SRR9114152: 0.68 RPKM

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MASGVFSLPMAEASKQKHQGKQMLEQQIQGIQVLTK*

>peptide 2 (31 aa)
QANKLQSNNLHFTTNQSQGHRSLAEAGIEIQ*

>peptide 3 (39 aa)
MRLDLLGRFTATKQVHQREAEPRTQLRENPSNNGRNRHA*

>peptide 4 (38 aa)
MAALVTLAPVGSFFSTPLMTPTATVCLMSRTAKRPRGG*

>peptide 5 (44 aa)
MAGDLKLFETTDNESRQRRGADRDAHLGGRRRNRAEAAAGMGDWE

>peptide 6 (44 aa)
MVIPLSRSAFSLSSTQAYLKDLLFISAASFSNLSITRLSIPPSL*

>peptide 7 (56 aa)
MGLVGIIFTIPASPFFRNLGAASISLPDRLSILVTSSANLTAMWEVPVIMFLMKSR*

Sequence

>CNT30721809
ACAAGCTAACAAGTTGCAATCTAATAACTTGCATTTCACAACAAATCAGTCTCAGGGGCACAGGAGTTTAGCCGAAGCAGGAATAGAAATACAGTAATTA
AACGACAGACAGATCATTGCTCGCTCGGGATAAGAGTCTGAAGCAACAAAAGCAATGACCGTGAACAAAATCCTTCTGCAAGATAGCGCGCCTATTTCTT
CTTGATGGCAGCCTTGGTAACCTTGGCGCCGGTGGGGTCCTTCTTCTCCACACCCTTGATGACACCAACAGCAACCGTTTGTCTCATGTCACGCACAGCG
AAGCGGCCAAGAGGAGGGTAGGTGGCAAAGGTCTCCACAACCATGGGCTTGGTGGGAATCATCTTCACGATACCAGCGTCACCGTTCTTCAGGAACTTGG
GCGCAGCCTCAATCTCCTTACCAGATCGCCTGTCAATCTTGGTCACCAGCTCAGCAAACTTGACAGCAATGTGGGAGGTACCAGTAATCATGTTCTTGAT
GAAGTCACGGTGACCAGGGGCGTCAATGACGGTGCAGTAGTACTTGGTGGTCTCGAACTTCCACAGGGCAATATCAATGGTGATACCCCTCTCACGCTCG
GCCTTCAGCTTGTCAAGCACCCAGGCGTACTTGAAAGACCTCTTGTTCATCTCAGCGGCTTCCTTCTCAAACCTCTCGATCACACGCTTGTCAATACCTC
CAAGCTTGTAGATCAGATGGCCAGTGGTGTCTTCTCCTTGCCCATGGCTGAAGCTAGCAAACAGAAACATCAAGGTAAGCAGATGTTAGAACAACAGATC
CAAGGGATCCAAGTGTTAACAAAGTAATATCTTGTCTATTTGTGAGGTCAACAGACAAGTAGAAGAAGCGTTTAACGAGATGGAATTACACTAGAAGCAG
TCAGACTGCAGGTACTTATTAGATCTACGAATTACTGCAGTGATAACGCTAACAAAATTCACCATACAAGTACATGAAGTTTATGCAGTAAACTCTCAAA
GAGAAGTCTCCTAGAGAGCTCACAGATCCTACAGAACCCTAAGTACTATACGAATCCATCTAACAATACATGCAACAAGGCACGGAGATGATTCAGGGAC
ATCTCGCGAGACCAAATCGGTAACAGAAACAGTAAAAACCTACAGATCAAGGCTACGGCATGAGGTAGTCATCAGAATTGAAGACAAAAAAAGACATGCG
GCTAGATCTACTCGGGAGATTCACCGCTACTAAGCAGGTGCACCAGCGCGAAGCCGAACCGAGGACTCAGCTTCGAGAAAATCCGTCAAACAACGGACGA
AATCGACATGCATAACCGCAAAAAGAGCCTAAAACTCGATCTACCCGCACGCCACAGCCACCGCACACAAACATGGCCGGAGATCTGAAGCTATTCGAGA
CCACGGACAACGAATCGAGGCAGAGAAGGGGGGCGGATCGGGATGCTCACCTCGGAGGAAGGAGAAGGAACCGAGCGGAGGCGGCGGCGGGGATGGGGGA
CTGGGAGGA