Detailed information on CNT30250739


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9MTM8|PSBM_OENEH, E-value = 6e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3057411Avena sativaAmborella trichopoda22.729.1586.27102reverse complement

Expression of CNT30250739

Peptides detected in this lncRNA

>peptide 1 (34 aa)
HNIELIQYYQTASSTLEFTGYPFFLPMGLYPQLL*

>peptide 2 (28 aa)
MEVNILAFIATALFILVPTAFLLIIYVKT

Sequence

>CNT30250739
CATAATATTGAATTGATTCAGTATTATCAGACTGCAAGCTCTACCCTTGAATTTACAGGATACCCCTTTTTCCTCCCCATGGGATTATATCCCCAGTTAT
TGTGAAAATAAAAAATAAAGAGAGGGAATTCCTAATCCAATCAAAAAAACCATTTTGGTCTTAGTATGGATAAAGGGTCTTCCTATGTTATAGTATTCCC
CTCTCAACTATGAATTGATTTGATAGATCCGATATACATAATATTGAATTGATTCAGTATTATCAGACTGCAAGCTCTACCCTTGAATTTACAGGATACC
CCTTTTTCCTCCCCATGGGATTATATCCCCAGTTATTGTGAAAATAAAAAATAAAGAGGTTATGGAAGTCAATATTCTCGCATTTATTGCTACTGCACTG
TTCATTCTAGTTCCTACTGCTTTTTTACTTATTATTTATGTAAAAACAA