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Detailed information on CNT30250185


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 2e-133

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552150Avena sativaOryza glaberrima69.3867.189.67571forward

Expression of CNT30250185

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQREWMTSSSRFLAKVSGSAERPAVSQP*

>peptide 2 (38 aa)
MVMRPSPKGEALEAFTGVPAIAGEESAMVEAAINCSLV*

Sequence

>CNT30250185
GACACACACATGCAGCAGCAGCATCATTCAGCAATGAAGTGGTCGGCCAAGCGCGCGCACGCAGCACACGCTAGAGGTTGAGCTTACTAATAAGCTCTTA
CTTGCCAGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACAGGGTCGGCGAGGTGGTCGGCGAGGCCGAGGGGGTCGAAGCTGCCTCCGGGG
TAGAGCGGGTCGACGATCTCACCCAGCGGTCCACCGGCGACGCGGTACCCCTCGACGGCGCCCATGAGCACGACCTGACAGGCCCAGATGGCGAGGATAC
TCTGGGCGTGTACGAGGCTGGGGTTGCCGAGGTAGTCGAGGCCTCCCTCGCTGAAGATCTGGGAGCCTGCCTTGAACCAGACGGCCTCGCCGAACTTGAC
GCCATTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGGGCGCCGAGCATGGCCCAGCGGGAGTGGATGACCTCGAGCTCGCGGTTCTTGGCGAAGGTC
TCGGGGTCGGCGGAGAGGCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCAGG
GGCTGCCGGACGCGGACACCTTGGGCTTGGCGGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGGGAGGCCCTGGAGGCCTTCACGGGGGTGCC
GGCCATCGCCGGGGAGGAGAGCGCCATGGTGGAGGCTGCCATTAATTGCTCGCTAGTCTGAGGTGAGGTGCTTCGAGTGAGCTCTCAGGTAGTAGTAGGA
GCTGGTGGTGTCTGTTGGTGCTG