Detailed information on CNT30247997


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521915Avena sativaSetaria italica57.143.8984.68124forward

Expression of CNT30247997

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MRVLSSEVLRSSSFSTYSRYSFFRPVSLARSRR*

>peptide 2 (37 aa)
QSFYHPFLQQNHTPDPYENQHVLVELHSLCVFFPRKC*

Sequence

>CNT30247997
CAGTCGTTTTATCATCCATTTCTTCAGCAGAATCATACTCCGGATCCATATGAGAATCAACATGTACTTGTAGAACTTCATTCATTATGCGTGTTCTTTC
CTCGGAAGTGCTGAGAAGCTCCAGCTTTTCCACATACTCTAGATATTCCTTTTTCCGTCCTGTTTCACTTGCACGGTCTCGAAGATAGCCCAGCCTCTGC
TTTTCATTTTCCAACCG