Detailed information on CNT30246606


BLAST search results

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 1e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523034Avena sativaSetaria italica47.0440.0596175forward

Expression of CNT30246606

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSSVMVLPVRVFTKICILAAVGGRLRALRRRRWWRRRGRVWDGWW

Sequence

>CNT30246606
TCAGTTTTAACGACAAACGGTAGACATATCTAAATGAGATGTAACCAACAGCTCGATTCAGTTCTCGATAGGTAGGGTAAAGTAAAGCATAGCAAACGCG
GAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATC
TTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATCTTGGCGGCGGTGG
GGGGTCGCCTCCGCGCGCTGCGGCGGCGACGCTGGTGGCGGCGGCGGGGTAGGGTTTGGGATGGGTGGTGGA