Detailed information on CNT30244044


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 4e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30143316Avena sativaLolium perenne56.8359.1794.57258forward

Expression of CNT30244044

Peptides detected in this lncRNA

>peptide 1 (30 aa)
QITLKFTYSLPLRTAVAQTVFTTPHRETLF*

>peptide 2 (47 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVIVLPVRVFTKICICREQ

Sequence

>CNT30244044
GGCAGATTACTCTGAAGTTCACTTATTCATTACCATTACGAACTGCTGTAGCACAAACTGTTTTCACGACACCACATAGGGAGACTCTGTTCTAGTATTA
CACAGAAGACGACTTGACACAGAGACAGACTTCACTTCAAGGGATACAGGGCAGCCGCAGCCGACCAGACAACCACAGCACAGCAGCAGCTCCAACACCA
AGACACTTACTGACCACCGCGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTCCTGCCGTCCTCCAGCTGCTTG
CCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGGACTCCACCTCAAGGG
TGATAGTCTTGCCAGTGCGGGTCTTCACAAAGATCTGCATCTGCAGAGAACAAA