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Detailed information on CNT30243951


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30396439Avena sativaTriticum turgidum34.0642.8892.77235forward
CNT30370401Avena sativaOryza glumipatula38.1292.9390.11263forward

Expression of CNT30243951

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRMRRCWSGGIPSLSWILALTLSMVSELSTSRVMVFPVRVFTKICIPPRRRSTRWRVDS

Sequence

>CNT30243951
CGACCCATCATAAGCAGCATTATTAATTATTAACAACATTAACAGAAAAACTGGGTGCAAACAATCAACAGCAAGATATCAGATGGGACAGTAAATTGAC
AACAGGCAGATTACTTCAAAGTTCATTTATTCATACTAGAACAGGCTGCTGTACCAGCAAATTGTTTGCACGAAACCAACACACACGATAGGGGGACTCG
ATGGTCCATTAACCAGACATAGTACTTCAAACGAGACTTGGAAGGGCGACAAGGCAGTCCACCGGACGACCAAGGCACAGCAGCAGCTCCAACGCCAAGA
CACTCACTGACCACCACGAAGGCGGAGTACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCG
GCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGA
TGGTCTTGCCAGTGAGGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAACTCTCAAC
CTCCAGAGTGATGGTCTTTCCAGTCAGGGTCTTCACAAAGATCTGCATACCACCACGGAGGCGCAGCACCAGATGGAGGGTGGACTCCTT