Detailed information on CNT30239280


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30542019Brassica oleraceaBrassica napus10010098.18274forward
CNT30718122Brassica oleraceaMalus domestica golden20.818.4587.7257forward

Expression of CNT30239280

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVWPKGVRFAAMAWRYSPSASGYASLNWT*

>peptide 2 (90 aa)
SSLVTQAYDPSGDNKVMGRCRDLPGYGLAQGSSVCRNGMALFSLSLRVCQFKLDLTSLGMVWPKGVRFAAMAWRYSPSASGYAGLNWTITF

Sequence

>CNT30239280
GTCGAGCTTAGTAACGCAAGCTTATGATCCGAGTGGAGACAATAAGGTGATGGGACGTTGTCGTGACTTGCCCGGGTATGGTTTGGCCCAAGGGAGTTCG
GTTTGCCGCAATGGCATGGCGTTATTCTCCCTCAGCCTCCGGGTATGCCAGTTTAAATTGGACCTAACTAGCCTGGGTATGGTTTGGCCCAAGGGAGTTC
GGTTTGCCGCAATGGCATGGCGTTATTCTCCCTCAGCCTCCGGGTATGCCGGTTTAAATTGGACCATCACTTTT