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Detailed information on CNT30234913


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378266Brassica oleraceaArabidopsis thaliana23.9919.0693.8565reverse complement

Expression of CNT30234913

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVTYLSVMPFELLFTQVASLPKSCEQLCLL*

>peptide 2 (53 aa)
KPISHTFCSLYTLERGLCVNESIISFDFLCLILENFLRFSDLQLSLLWSLIYL*

Sequence

>CNT30234913
TAAGCCTATATCTCATACGTTTTGCTCTTTATACACGTTAGAACGAGGATTATGCGTCAATGAGTCAATAATCTCTTTCGATTTTCTGTGTTTGATCCTT
GAAAATTTTCTACGCTTCTCAGATCTTCAGCTTTCTTTATTATGGTCACTTATTTATCTGTAATGCCTTTTGAATTGTTGTTTACACAGGTTGCATCACT
ACCAAAGAGTTGCGAACAGTTATGCCTTCTCTAGGACAAAACCCAACAGAGGCTGAGCTCCAAGACATCCT