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Detailed information on CNT30234823


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201082Brassica oleraceaPisum sativum24.5114.9287.588forward
CNT30622174Brassica oleraceaCajanus cajan24.5112.0985.2388forward

Expression of CNT30234823

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MKNSFQAPLIGRVMLTILLFGVTTIAQKRGPPSKPKTCYGCS*

>peptide 2 (42 aa)
MTPFASLTDNFVTLDCKITSLVASLYNSNNIYNNTCLYQRKK*

Sequence

>CNT30234823
GTGTTTGTAATTTTAAAACACATTTAGTTCATTATCAAAGATGAAAAATTCTTTTCAAGCTCCGCTTATTGGTCGTGTTATGCTCACAATTCTTCTTTTC
GGAGTAACGACGATTGCCCAGAAAAGAGGACCACCATCAAAACCAAAAACTTGTTATGGTTGCAGCTAGTTCATGACTCCATTTGCAAGCCTCACGGATA
ATTTCGTTACCCTCGACTGCAAGATCACGTCTCTCGTTGCGAGCTTGTATAACTCAAATAATATTTATAATAATACATGCCTTTATCAAAGAAAAAAATA
ACAATATTATTAATTGTTGTTTGTTTTGTAGCATAATAAAGTGTATTAAGTTTCCGAAC