Detailed information on CNT30201082


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226496Pisum sativumHordeum vulgare37.4695.2682.81221forward
CNT30234823Pisum sativumBrassica oleracea14.9224.5187.588forward
CNT30172901Pisum sativumTrifolium pratense22.8814.9789.63135reverse complement
CNT3018021Pisum sativumZea mays27.294.1583.23161forward
CNT30627897Pisum sativumDaucus carota51.022090.37301forward
CNT30683107Pisum sativumTriticum urartu63.934.8186.47377forward
CNT30622174Pisum sativumCajanus cajan65.0852.7592.97384forward
CNT30596588Pisum sativumOryza meridionalis39.1599.5785.71231forward

Expression of CNT30201082

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MLPELLDSLRHQVHFPKGVLKFLHRIGVQNHLQISRSEQAYAKREYHLKQQG*

>peptide 2 (94 aa)
DYKVSIAGNSNLISFQTSQAAANSGLHLQASRIIALPSRARSRPSFRACTHASRATRFATAPGAFPQGCPKVPPPNWSTESSPNISVRAGICQT*

Sequence

>CNT30201082
TGGATTACAAAGTATCCATTGCTGGGAATTCAAATTTGATTTCCTTCCAGACTTCACAAGCAGCAGCTAATTCAGGACTCCATTTGCAAGCTTCACGGAT
AATTGCATTACCCTCGCGAGCAAGATCACGTCCCTCATTCCGAGCTTGTACACATGCTTCCAGAGCTACTCGATTCGCTACGGCACCAGGTGCATTTCCC
CAAGGGTGTCCTAAAGTTCCTCCACCGAATTGGAGTACAGAATCATCTCCAAATATCTCGGTCAGAGCAGGCATATGCCAAACGTGAATACCACCTGAAG
CAACAGGGATAACACCTGGTAAAGAAACCCAATCCTGAGTGAAATAAATACCGCGACTTCTATCTTTTTTAATATAATCATCACGTAGTAAATCAACAAA
ACCTAAAGTAATCTCCCTTTCCCCTTCAAGTTTACCTACTACAGTACCAGCGTGCATTTCCCCAAGGGTGTCCTAAAGTTCCTCCACCGAATTGGAGTAC
AGAATCATCTCCAAATATCTCGGTCAGAGCAGGCATATGCCAAACGTGAATCCCCCCTGAAGCAACAGGGATAACACCTGGTAAAGAAAC