Detailed information on CNT30233141


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30627927Ananas comosusDaucus carota3.5333.0494.74114forward

Expression of CNT30233141

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MCEWRMKETNLCHPSHHYFVVYSCSLAQNRMEIPAFLARDTDNGSVV*

>peptide 2 (29 aa)
MLPFPMLLALFFVGLHYRNGIGWRIKGRD*

>peptide 3 (33 aa)
MGTRPTFLDLANNAIKDTAKTDRIKSVPSTRLA*

>peptide 4 (34 aa)
MLNLENPDNCSIMKCQNMPEQSNNMSSILTQINW*

>peptide 5 (29 aa)
MTIVLPSVNKKMELLQINVLYSEIDICKY*

>peptide 6 (31 aa)
MTLPQKRNNNNLSMTGIMTFRPLKGISIRNF*

>peptide 7 (40 aa)
MHCLFRKLIRVIKALFPPLFHLPLPLQKKKKTRSSYNGLC*

>peptide 8 (52 aa)
MLVDRIFHYSYMIQSIISYLIPLNSISVKLPRSLPLQDKEKVPIEVFALKRS*

>peptide 9 (39 aa)
MYRLVPRVSPLHGTIVPMSQIEPPYAGTAHFLCIVYFEN*

>peptide 10 (39 aa)
MQVQHTSYALFISKTNKSNKSVIPPLIPPSPSPPKKKKN*

>peptide 11 (51 aa)
MVDATVRIHAAFPNVTSSLFCGLTLSQWYRLEDKGSRLNWFSANNQHIRAN*

Sequence

>CNT30233141
TGGATTCGCAATCTGAATATTAATTAAAATTATCTTCTACATCAAAATCTGCAAGGCTTGAACTCACACATCCTTCACAAAATAAACAACAAGATGACAT
CATCTCAAATTCATAACTAAAACTAAAAATTCCATTTTCTTAATCACTGAGAAACACTTGACTTAACATGCAACATTATTGAAAAATACCTAACTTTTAA
GGAACACCAAAAACTAATATTACTACAGAAAACCATTCAAAGAAATCCCACATATCGTTCATAATAATAGAGTAGGGTGACGATATAATCTATTACATAT
AGTTTTTAAACATGACAATAGTCCTCCCTAGTGTAAACAAAAAAATGGAACTCTTACAAATCAATGTCCTCTATAGTGAAATTGATATTTGTAAATATTG
ACATTGATTCTTTGTAAAACCTCAAACGTGACATATAACACAAACCCTAAACCCTAAACCCTAAACTCGAATTAACTTCATATGACGCTGCCTCAAAAAA
GAAACAATAATAATCTTTCTATGACAGGTATAATGACATTTCGCCCACTCAAGGGAATCTCAATTCGAAATTTTTAGCGTCCACATATCTTAGAAGTTAG
AAAGTAACAACTACTAGTTTTTTCCAGAAAAAATCTCCTAGGCTTCGTTTTAGTGTCCACATATCAAACCATTTCTTCTGACTCTTTTTCAAATTCGATA
AATGTTGGTTGATCGTATATTTCATTACAGTTATATGATTCAGAGTATCATTTCCTATTTGATCCCTTTGAATTCCATATCTGTTAAACTCCCACGAAGC
TTACCTTTGCAGGATAAAGAAAAAGTTCCAATTGAAGTTTTTGCGCTAAAAAGATCATAAGTTTCTAACCAAAGAATAAGCTCCAAATTTTTCTTTCTAA
AATGTTCTGGTACAGGTTCCTGCAGCTGAAAGCAAAGGTAGAATTTAGGTCTCACACTACACCAAATGGGCACTAGACCAACCTTTCTCGATCTAGCAAA
CAATGCCATAAAAGACACTGCAAAAACGGACCGGATCAAATCGGTACCTAGTACCCGTTTGGCCTAGCTTCTGCTTTGACTTTCAGAAGAAGCAACCAAT
AAATATTCGACAAATGAAAAAGTTTGGAGCACTTGCTATGCTTTAAAGTTATTTTCAGAAGCAGAAAATACACTTTGGAGGTTTTAAACAAGAAATGAGG
AAGAGTTTTAACAAGAAAGCAATTAGTACTTCTACAAATAGCACTGCTCATTTTTACTCCTACTGTTTTAATGGTTAATGTGAACCCTTTCATCACCTCT
TCTTAACATAAGCCAAGCTGTGAATCACAGGACAAAATTAGAGAGAATGTGCGGGTGGTTATAGCAAGCGGCGATGGAAGAATGAATAGATGCATGAGTT
AACTAACGATCTCACCAAACTCAAACATAGATGTCTAAGCAAATAACAACAAAATAACTTGCATATATGCTAATAAAAGTAACCCAAAAATAGATCTCTA
GAGCAGGAACAGCAAAATAAGATTAGCAAATAACCAGATTATATGCTCATCAATCCAGCTCAAACATAGATGTCTAGAATGACAACCTAGCAGGACGGTA
AAAGGAGATTCAGTAATTCAACAATGATATGAATCGATTGAGCACAGACTAAAAGATAACTTATGTAAGGCATGGTCGACGCAACAGTTCGAATCCATGC
TGCCTTTCCCAATGTTACTAGCTCTCTTTTTTGTGGGCTTACATTATCGCAATGGTATAGGCTGGAGGATAAAGGGTCGAGATTGAATTGGTTTTCAGCA
AATAACCAACACATACGAGCAAACTAACTCGAAGTACATGCACAGGATAGCAAACTGAATGGCGAGAGAGGAGCAGAAAATACAGCAAAGGACCAGCATA
TATACTGAGTAGACTAACTGAAAGAAAGTGTCTAGGATCGTATACCGAAGGGCGGCATAGTTAGATTCAACAAACCACCAGTATACATAATCATCAATCT
AACTCCAAAATAAAGAGATGTCCAGGATGACAAACTGAGCTACCAGGAGAGAAACACAAGATTCGACAAATTCCCGGCATATATACTCTAACTAACAGAA
AATTAGATGTCAGAACTAGCAAGACAGCAAAATAAGATTCAGCAGATAAGCAGGATATAGACTCATTAATCTAATTCAAACAATGATGTCTAGTATAGCA
GAACGAACTAGCAGGATTTGGAAAAAAAACTCGACAAATAACTAGCATGTATACTTACCAAACTAACTCAAATACAGCACCATACGATGGCAAGCTGAAC
TAACAGGACAACAAAATGTAATTCATCAAATAACCAGGATACATTCTCATCAATCTAACTAAAAAATAGATGTCCAACTGAAAGAGCAATAGGATAGTAA
ATTTCAACAAATTAACTGTCATATGAGTAGAACAAGCTCAAATTTATAATATGCCTCATGTGTGAATGGCGGATGAAAGAGACTAATCTGTGTCACCCTT
CCCACCACTATTTTGTGGTTTATAGTTGCTCGTTAGCTCAGAATAGAATGGAGATTCCTGCATTTTTGGCACGGGATACTGATAATGGTAGTGTCGTATA
AAGGGCCCTAAAGGGTCATGGCATTTTTAATAAAGCTAGTTAGCCCATGAAGATCCAAAATCAAAATCAATAAGCTATTGTAAAAATAACTCGTATAATG
ACACCGATCAAAATCTAATTTTCAGGATGAAAACCCGAAATTCAAATAGCTCATAAATGCTTAATTTAGAGAACCCGGATAATTGTAGTATTATGAAATG
CCAAAACATGCCAGAACAATCCAATAATATGAGTTCAATCCTGACTCAAATTAATTGGTAATAGTTACAATACTAAAACCAATAATTAGCATACTGCAGG
CATCGCCTTTTGCCCCTCACGCCATATCGTGCTGGTTGGGTGACCGAACATGGCACAAGTCTGGGTCGACTGGCACTAGAAATTGTGGAGTGCCACCCAT
GTATCGCCTAGTGCCGCGAGTGTCGCCTTTGCATGGAACTATAGTACCCATGAGCCAAATTGAACCACCCTATGCAGGTACAGCACACTTCTTATGCATT
GTTTATTTCGAAAACTAATAAGAGTAATAAAAGCGTTATTCCCCCCCTTATTCCACCTTCCCCTTCCCCTCCAAAAAAAAAAAAAAACTAGGTCCTCTTA
TAACGGGTTATGCTAGGATAACTCGTT