Detailed information on CNT30627927


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0G9Q1|YCF2_DAUCA, E-value = 2e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30233141Daucus carotaAnanas comosus33.043.5394.74114forward
CNT30355197Daucus carotaLactuca sativa36.5219.7895.24126forward
CNT30644907Daucus carotaCannabis sativa26.0919.2394.4490forward

Expression of CNT30627927

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLVDHIFHSSSMIQSILSYLIPLNSIFEVAIGSIH*

Sequence

>CNT30627927
AACCATCTCTTCTGACTCTTTTTCAAATTCGATAAATGTTGGTTGATCATATATTTCATTCTAGTTCTATGATTCAGAGTATCCTTTCCTATTTGATCCC
TTTGAATTCCATATTCGAAGTTGCGATCGGATCTATTCATTAAAAAGAATCGATTCAATACATTTAGGTTGTTGCTAGCAAATACCATTTTTTTTGGTTT
TGGATCTTCCAAATCATTTCCGCAGGAGATCCGGACCCATTTTTTTATGATCCTTCGATAAAAAGATTCATTCTCTTCATAAAAAAAAGGAGGTAGAGCC
AATAAAGATTTTTTTTCGATTCATCCCTAGACACACACACACAAA