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Detailed information on CNT30226686


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SU35|ERLL1_ARATH, E-value = 2e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30685047Hordeum vulgareTriticum urartu51.0550.4787.27267reverse complement

Expression of CNT30226686

Peptides detected in this lncRNA

>peptide 1 (39 aa)
SRVELTQLEQTLYSKVRVQVGISFYKYANRAFRYHNGIQ*

>peptide 2 (41 aa)
MQIVHLDTITGYNDIDQSRAYQACMHERGSPCKVLTYGARV*

>peptide 3 (93 aa)
MDQMGQVKLAGHFLPHWLSRRVRSMGTLSLMPRMLALMAVQRHTAASRSASPPRSGQHCSFAGTPILSFSRFSTLAHTPSFNVLIEQLPPPVDG

Sequence

>CNT30226686
TCACGAGTCGAGTTAACCCAACTTGAACAAACTTTATATTCCAAGGTACGTGTACAAGTAGGTATATCCTTTTACAAATATGCAAATCGTGCATTTAGAT
ACCATAACGGGATACAATGACATTGATCAATCACGAGCTTATCAAGCATGCATGCACGAGCGAGGGAGCCCATGCAAAGTCCTGACATATGGTGCGCGCG
TATGACATGCAATATATAGCTACGAGTAAATCCATGGATAGATGGATCAGATGGGGCAGGTGAAGTTGGCGGGGCACTTCTTGCCGCACTGGTTGAGTAG
GAGGGTCAGGTCGATGGGGACGTTGAGCTTGATGCCGAGGATGTTGGCCCTGATGGCGGTGCAGAGGCACACGGCGGCGTCGAGGTCGGCGAGCCCGCCC
AGGAGTGGGCAGCACTGCTCGTTCGCCGGCACGCCGATCTTGAGCTTCAGCAGGTTCAGCACGTTGGCGCACACGCCCAGCTTCAACGTGTTGATCGAGC
AGCTGCCCCCGCCGGTCGACGGC