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Detailed information on CNT30225199


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596697Hordeum vulgareOryza meridionalis28.559.0794.74228reverse complement

Expression of CNT30225199

Peptides detected in this lncRNA

>peptide 1 (33 aa)
ARIISLPSRATSRPSLRACTQASKSTRLAAAPA*

Sequence

>CNT30225199
CTGCTCGGATAATTTCATTACCTTCGCGAGCAACATCACGCCCTTCGTTACGAGCTTGTACACAAGCTTCTAAATCCACTCGATTAGCTGCTGCACCAGC
TTGAAATCCAACACCTGCTTTAGTTTCTGTTTGTGGTGACATAAGTCCCTCCCTACAACTCTTGAATTAAGAATTCTCAGAATAACAGAGTCTACTCGAT
GTTAATTAGGCGTCAATGAAACTTCAGCAAAAATCTCGTAAAACAAAAGGATATTCAATTAATATAATATCAACTCATTAAAGAAAATTGAGGGCATGCT
TAGGTTAATGAATATGTTTCATTCATATATAATGCGTACACCCTGTGTATGTTCTATCCTATAGGAATTCCACTATAGGAATTCGATAGGAATTGAGTTG
TTGTTATGGTAAGTTAACACGGTTCGTTATTAAACCATGGATTTGATTTACCAAATCCATCATTATTGTATACTCTTTGATAGGTATAGCGCAACCCAAA
TTAATCCCTAATCCTTATTTTACAAGTTCTTAATAGGTCTCTTTTCTTATTTTGAATGCAAATACCTAACTAAATACTAATAAAATTCTTTGTTGACAGC
AATCTATGCTTCACATAGTATATATTTTGTATATCGAAGTCCTAGATAGGAAAGTAGAGTAGGCACAGATCCTCCACAAAAGGCAAAATGTATATGAAAA
AAAGATTGATTGAACTTTCCAACGGACTCATTCCATGAGTAAACGATTGAATGGGATTCGCTTGGGCAACGAAATCAAGTCCTGGTCCCCTTTTCTGTCT