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Detailed information on CNT30596697


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000401, E-value = 1e-175

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225199Oryza meridionalisHordeum vulgare59.0728.594.74228reverse complement
CNT30554166Oryza meridionalisOryza glaberrima45.3418.27100175forward
CNT3018154Oryza meridionalisZea mays49.2216.6791.05190forward

Expression of CNT30596697

Peptides detected in this lncRNA

>peptide 1 (98 aa)
HNYHIIFKKKEFIEILIFFLLNNAKSTPKKYPKIQKSKGNELVNSIREKRGPALDFVAQTNPIQSFTHGMSPSESSINLFFIYILPFVNDLCLLYFLI*

Sequence

>CNT30596697
CATAATTATCACATAATTTTCAAAAAAAAGGAATTTATCGAAATTTTGATTTTTTTCTTGTTGAATAATGCCAAATCAACACCAAAAAAATATCCAAAAA
TCCAAAAGTCAAAAGGAAATGAATTAGTTAATTCAATAAGAGAGAAAAGGGGACCAGCACTTGATTTCGTTGCCCAAACGAATCCCATTCAATCGTTTAC
TCATGGAATGAGTCCGTCGGAAAGTTCAATCAATCTTTTTTTCATATACATTTTGCCTTTTGTAAACGATTTGTGCCTACTCTACTTTCTTATCTAGGAC
TTCGATATACAAAATATATACTACTGTGAAGCATAGATTGCTGTCAACAGAGAATTTTCGTAGTATTTAGGTATTTCCACTCAAAA