Detailed information on CNT30225131


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 8e-174

BLAST vs NONCODE:
NONBNAT007398, E-value = 4e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616124Hordeum vulgareSesamum indicum58.5757.2383.15653forward

Expression of CNT30225131

Peptides detected in this lncRNA

>peptide 1 (81 aa)
GATWKWTNQTIILHKTLVIYIMVVQLRPQENTPHGEHSPKTPYLPGTKLVAKAHALLLTGSAMWSARLSSGPFPVTIAWTK*

>peptide 2 (31 aa)
MRYPSTAPMSTTWHAQIARILCAWTRLGLPR*

>peptide 3 (29 aa)
MAHRQWITSSSRFLAKVSGSAESPAVSHP*

>peptide 4 (71 aa)
MVTRASPKRTKDGTFFTVLPAKVEEERDMVAAAIGKLRKVSAVWVLKEMSECGDDLREEGGGDYLRQQEVS*

>peptide 5 (38 aa)
MPQGLQPGQEGRSCHLGRVGRRSHRVGRLQCGTPRRHP*

>peptide 6 (35 aa)
RRDMEVDKSNHYFAQNSRNLHHGSTTQTTRKHASW*

>peptide 7 (32 aa)
MARRPFLISFTLSSANASGSSARPRGSKLPPG*

Sequence

>CNT30225131
AGGCGCGACATGGAAGTGGACAAATCAAACCATTATTTTGCACAAAACTCTCGTAATTTACATCATGGTAGTACAACTCAGACCACAAGAAAACACGCCT
CATGGTGAGCACAGTCCCAAGACACCTTACTTGCCGGGGACAAAGTTGGTGGCGAAGGCCCATGCATTGTTGTTGACGGGGTCGGCGATGTGGTCAGCGA
GGTTGTCGAGTGGGCCCTTTCCAGTGACGATAGCTTGGACAAAGTAGCCAAACATTGAGAACATGGCGAGGCGACCATTCTTGATCTCCTTCACCTTGAG
CTCGGCGAATGCCTCAGGGTCTTCAGCCAGGCCAAGAGGGTCGAAGCTGCCACCTGGGTAGAGTGGGTCGACGATCTCACCGAGTGGGCCGCCTGCAATG
CGGTACCCCTCGACGGCACCCATGAGCACCACCTGGCATGCCCAAATAGCTAGGATACTTTGTGCGTGGACGAGGCTTGGGTTGCCAAGGTAGTCGAGAC
CACCCTCACTAAAGATCTGGGAACCGGCCTTGAACCAAACAGCCTCACCGAACTTGACGCCGTTGCGAGCGAGCAACTCAGGAAAGACACAACCAAGTGC
TCCGAGCATGGCCCATCGACAATGGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCAGGGTCAGCTGAAAGTCCGGCAGTGTCCCACCCATAGTCG
CCTGGGAACTCACCGGTGAGGTAGCTCGGGGGCTCACCGGAGAGTGGGCCGAGGTAGAGCACACGGTCGGCACCGTACCATGGGCTGCCGGAGGAAACTT
GCTTTGCCTTTGCTCCGGTCTTGCGCATGGTGACTCGGGCTTCGCCAAAGAGAACCAAAGATGGTACGTTCTTCACCGTCTTGCCGGCAAAGGTCGAGGA
GGAGAGGGACATGGTGGCTGCCGCCATTGGAAAGCTAAGAAAAGTGTCCGCTGTATGGGTTCTCAAGGAGATGAGTGAGTGTGGAGATGATTTGAGAGAA
GAGGGGGGAGGTGACTACTTAAGGCAGCAGGAGGTGTCATAGGGAATCCATTTGGTGTGTAATCTGACAAGATAACCAAGGATAGAGAGAAAAATCTTGA
GCTTTGCTCCCATTG