Detailed information on CNT30222502


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30557828Hordeum vulgarePanicum hallii22.0925.7991.2357forward

Expression of CNT30222502

Peptides detected in this lncRNA

>peptide 1 (58 aa)
GLACEAGELGEAGLVDGGGDELAAEDDVGEEDGPSGTCPPRDPSSLAPTNPALPLPLA*

>peptide 2 (85 aa)
LVSPARPVSLARPALLTAEATNLQPRTMWERRMVRPERVRRVIHLLWLRPTPPSPSRSLSVRVALLAVAEHRPREGVSERASERAM

Sequence

>CNT30222502
TTGGTCTCGCCTGCGAGGCCGGTGAGCTTGGCGAGGCCGGCCTTGTTGACGGCGGAGGCGACGAACTTGCAGCCGAGGACGATGTGGGAGAGGAGGATGG
TCCGTCCGGAACGTGTCCGCCGCGTGATCCATCTTCTCTGGCTCCGACCAACCCCGCCCTCCCCCTCCCGCTCGCTTAGCGTACGTGTTGCTTTGCTTGC
GGTTGCAGAGCACAGGCCCCGGGAGGGAGTGAGTGAGCGAGCGAGCGAGCGAGCGATG