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Detailed information on CNT3021038


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30572431Citrullus lanatusVitis vinifera18.2120.5288.8963reverse complement

Expression of CNT3021038

Peptides detected in this lncRNA

>peptide 1 (41 aa)
PSSVVRACNLNEGTNVVGGWSGPCCRVSSGYSLACPFQVRS*

Sequence

>CNT3021038
CGCCGAGCTCGGTAGTGCGAGCTTGTAACTTGAACGAGGGCACTAATGTGGTTGGAGGCTGGTCCGGTCCATGTTGTAGGGTCTCCTCCGGATACTCTCT
GGCCTGCCCGTTCCAAGTAAGGAGTTGAGCCTTGGGCTTTGGGCGAAGGCCTAGAGTTCATTGCTCATAGAGATTGGTGGGCACCGCGTGAGGCTGGTTT
CACAGAACAGCGTTATCACCCTCTCCCTTCGGTGGAAGGATAACAGGCTGGTTCCTGGTGGCCCAAAAATGCTCCGTGGATAGCTCTCAGCCCGACAACA
ACATTTTTTGAAAATCAACCAAGACTTCTTCGAATTTCGCGTGGAT