Detailed information on CNT30572431


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618136Vitis viniferaSesamum indicum27.0414.5989.1683forward
CNT3021038Vitis viniferaCitrullus lanatus20.5218.2188.8963reverse complement
CNT30236753Vitis viniferaBrassica oleracea22.1522.1588.2468reverse complement
CNT30704539Vitis viniferaPrunus avium20.525.8888.8963forward

Expression of CNT30572431

Peptides detected in this lncRNA

>peptide 1 (35 aa)
KVVVGLRAAEEVSLGPWSTGSLSFHRGEREVNAAL*

Sequence

>CNT30572431
AAAAGTGGTTGTCGGGTTGAGAGCGGCTGAGGAGGTATCGTTGGGCCCGTGGAGTACCGGCTCGTTGTCCTTCCACCGAGGGGAGCGGGAGGTGAACGCT
GCTCTGTGAATCCAGCCTCACGCGGTGCCCTCCACTCTAGGAACCACGTCACCCAACCCTTCGGTCGGATCACAAGATTCAAACTCCCCACTTGGAACGG
GCGAGCCAGTGTCTCAACCCCAGCGCACCCTACCTCTCCAGCCAAACCAACCTTCAACCACCTTCATGCCCTCACTTGAGTCACAAGCCCACGTTACCAG
GCCCGGC