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Detailed information on CNT30210233


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30309894Helianthus annuusCamelina sativa16.434.9391.7873forward

Expression of CNT30210233

Peptides detected in this lncRNA

>peptide 1 (48 aa)
LTSSPNTKLRENLRDLIQDACQVEEEENEEIEEEASKDETTIKVENEN*

>peptide 2 (32 aa)
MDLCVEVVHSLGGGFLLVGFSFFLVLMRYTLV*

Sequence

>CNT30210233
CCTTACTTCTTCGCCAAACACAAAACTCAGAGAAAACCTAAGAGATCTCATCCAAGATGCGTGCCAAGTGGAAGAAGAAGAGAATGAGGAGATTGAAGAG
GAAGCGTCGAAAGATGAGACAACGATCAAAGTAGAGAATGAAAACTAGAATGGCTTTTTCCAATCTTTCTTCATGCACATACATGATCTCCTGTAGATTC
AGGGAGTTTTGTATGTAAAAGATGGATCTTTGTGTTGAAGTTGTTCATAGTTTAGGTGGTGGGTTTCTACTTGTTGGCTTTAGTTTCTTTCTTGTTTTAA
TGAGATACACTCTTGTCTAAGTTTGTTTTTGTTGAGTGTTTCCAATTGCTTATTTTATCTACTTTATTTATATTATTTAGTCCAATGCTGGAGGGTGTGG
TATAAAGCCCCTAGAGGTTTTATCATGCCACTTCACCGCCACGTC