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Detailed information on CNT30209714


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30366518Helianthus annuusSorghum bicolor15.8337.0488.33120reverse complement

Expression of CNT30209714

Peptides detected in this lncRNA

>peptide 1 (47 aa)
TYNYESNTSNTKQLTRNKCESERSKTRVVTCCMAVVSWCREMFGQVL*

>peptide 2 (37 aa)
MTSRPHGLYGLGHTRATMAITMGSKAVRRIVLCNSGT*

>peptide 3 (61 aa)
MLEEGGDDVTSAWPLWAGPHTCYNGNYNGKQGCKADCSLQLGNMKLESLVIADQHAAVNMYP

Sequence

>CNT30209714
CAACGTACAATTACGAGTCAAACACATCAAACACTAAACAGTTAACGCGTAATAAATGCGAGAGTGAAAGGTCGAAAACTCGAGTTGTCACATGCTGCAT
GGCTGTCGTCAGCTGGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCTCGTTTTGTGTTGCTGAGACATGCGCCTAAGGAGAAAGTATT
TGCAGCCGAGGAGCCGAGTGACGTGCCAGCGCTACTAATTGAGTGCCAGCACGTAGCTATGCTGTTAGTAAGAAGGTAGCCAGCGCCTTTCGAAGCCTAA
GCCCTTTCTTTTCTAGCGTGCGCTTTAGTTTGATTGCAGCTAGCGCGCTTGACTAAGAAGATAGAAAGGGTTTTTCTCGCTTGGTTAGTAAAGTCAAGTT
TTTGGCCTTATCTTGCAGGTGACGACGACATCGATTTGACGGCAGAGAAAGACTGGGCATTCAGGCGAGCCGCCCGGTGGTGTGGTACGTAGTGGGTTTA
GTATGCCCCGCCAAAACGGCTCCGAAACAAACAAAAAGGTGCGTGCCACACTCACGAAGGACTACCAGTGATATGCTGGAGGAAGGTGGGGATGACGTCA
CGTCCGCATGGCCTTTATGGGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGATTGTTCTCTGCAACTCGGGAA
CATGAAGTTGGAATCGCTAGTCATCGCGGATCAGCATGCCGCGGTGAATATGTACCCG