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Detailed information on CNT3020834


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30655409Citrullus lanatusRosa chinensis30.8833.9695.24252forward

Expression of CNT3020834

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MKGATTLNNLKAWPGLKEEESRPCREADRRGSL*

Sequence

>CNT3020834
AAAGTTGATACGGAGAGAATAAACGGACTCTTCGAGGGCTACTTAAGGCACTTTAGTGGAAACCTGTAGGACTGGAGCTGTTGGATGTTGCTCAGTGCTG
CTATAACTTAACAACCAAAAAGCTCTGCGTCGAACTTCAGCCCCTTCGAGTTGGCCACGAGGCAACAGCCTCTGACGCCCCACACCATTGCGGCTGGAGG
GGTCTTGCCCATCAGCCTACTTTGCCAAGAGGTGGGGCAGGAGCGCAACGACCTAGCCCAAACCCACTTAGATGAAGCTGCAAGGCGTATGAAGGGAGCG
ACGACCCTAAACAACCTAAAGGCTTGGCCCGGTCTGAAGGAAGAAGAAAGTCGACCTTGTAGAGAAGCGGATAGGAGAGGTAGCCTATAGACTCAAGCGA
TCAGCTCGGTGAAAACTAACCCCGTATTCTATGTGAGTCAGTTGACTTCGATTAGACCAGACCGACCCTGAGAGGAACGTGCCCACGAGGGCACCGCCAG
ATGTTGTAGATGAACTTCCCCAAGAAGAAGTTTAGTATATCATAGCTGACCGCACCATGGGCGGGACGAGACCATACACCCACTACACGAATAGAATACT
ACTTAGTAAAGTAGAAGGGCCAACCTGAGAGCGAGGCAAGCTGGGAACGGGTTGAAACTGATGATTCAAAGACCAAGTCAGAGACTACTGGACGTCTCGC
AGAGCGACTCTCAACGAGGACGTTGAGACTTTTCGAAAAAAAAATGTTTTTTTTTTGGCTTAATCCGCACTAAAGATTAAGGAGTACAAGTGTACTCCGG
CTAATTAATAAGAGAA