« Back to Pisum sativum search


Detailed information on CNT30202069


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30147536Pisum sativumMedicago truncatula30.9712.896.69302reverse complement

Expression of CNT30202069

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNSKLRTRQAVLTPSRTLLWISGKAQDKRRFVYLSC*

>peptide 2 (55 aa)
MRSSEYNQVQQSRREELICNSRSSIGRKCINEFPYLGSRDRTSSNRDQCSRLGSM*

Sequence

>CNT30202069
GTTGTAAGTTCAAAGGTCTTTTCGAACGGGGTTGTTGTTAGCCGTGGGTAGTTTGATGTACTGGTTTTGGGTGCAGGGTGGTGATGGAATCCTTCTTCTG
CTCACCGGGATTTAAGGCTCCATCCGAATCAAGGAGAAGCCACAGTCTAAGAAACCAAGGTATAATGTAATTATGTACACAGAGTCAACACCTCTACCAA
TAAGGAATCAAGTAAAGTAATCGGTTGAACGCGGTCTAGGTAGAAAGAAGTATTCCTATTCCTGCGTTGTGCCGGAAGTCTTTAAGACTTTCTTGATGCG
GAGTAGTGAATATAATCAAGTTCAGCAGTCCAGGCGGGAGGAGTTAATCTGTAATTCCCGTAGTTCCATAGGCAGGAAGTGCATCAACGAGTTTCCGTAT
CTCGGCAGTAGGGACCGAACTTCAAGCAATAGGGATCAGTGTTCAAGGCTAGGATCTATGTAATATGAATAGTAAGTTGCGCACCCGTCAAGCAGTTCTC
ACTCCAAGCAGGACTCTTCTATGGATTAGTGGGAAGGCGCAGGATAAGAGAAGATTCGTCTATCTAAGTTGCTGACGAGCCAGTACTGTTCGTGGGCAAG
CAAAGTTTCAACTCGCAATCCATTTCTACAGAACGGAGAAAGGTTATGCAGGCGGGTGTTCATTTCATTTTTTTGTTTGGCTACAACGGGTACGCTCTCT
AGAAGATTTGCTCGGGGCTGTTCACTTTAACTTGGTCGCCTGGTATCTTTGAAACCTCTTTGCTTGCGGAGGCAGGAGTGCGTCTGAGAGAGCGCTTCGC
GAAAGAATCGTGTGGCGCGGTGAAAGGTTTCCCGTTGGGGTTTCCGGCCCCCAGGTCTTCACCTAATTGTGGAAGAGGGGAGGTGCATTGAGTATAAACT
CTCTCTCGCGCCTTTCTTCAGCTTGTTCCTGTTCGTCTATTCGGGACGGGGCAGGCAGCCCACATACATACATTA