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Detailed information on CNT30147536


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698074Medicago truncatulaQuercus lobata5.0447.9893.28119forward
CNT30729667Medicago truncatulaCorchorus capsularis12.9333.5987.54305forward
CNT30632424Medicago truncatulaVigna unguiculata14.3344.394.67338forward
CNT30202069Medicago truncatulaPisum sativum12.830.9796.69302reverse complement
CNT30193417Medicago truncatulaSecale cereale5.7241.6791.85135forward
CNT30172526Medicago truncatulaTrifolium pratense5.0420.5292.44119reverse complement
CNT30438074Medicago truncatulaAegilops tauschii23.7424.0487.14560reverse complement
CNT30655398Medicago truncatulaRosa chinensis22.8124.1889.78538reverse complement
CNT30622536Medicago truncatulaCajanus cajan38.5354.8994.06909forward
CNT30596810Medicago truncatulaOryza meridionalis21.4526.6286.56506reverse complement
CNT3035318Medicago truncatulaCucumis melo22.3432.5189.18527reverse complement
CNT30175599Medicago truncatulaVigna angularis13.8220.294.17326forward
CNT30725731Medicago truncatulaLupinus angustifolius42.2266.5392.47996forward

Expression of CNT30147536

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLNQGAQGTLYKGPFPSNDNCLFLLRRPCTKPTPPPPPIQYLLFRW*

>peptide 2 (47 aa)
MGGRSRCPGRTRLLLTLEDHWKRPGTRACRERSTPGGRASTVSPGHS*

>peptide 3 (46 aa)
MARKGNPISVRLDLNRSSDSSRFSEGDRESHRMGQSFPSVCPIYVE*

>peptide 4 (38 aa)
MVVKDKVLASVGIRICSVSVLSDLAWSTIWRVCETKTF*

>peptide 5 (32 aa)
MTTASSCCEGLARNQPPPHPRSSTCCFAGRPT*

>peptide 6 (33 aa)
CFCQHDSKHGLAELNDQSFGCFHLWPSSTALTP*

Sequence

>CNT30147536
CCTGCTTTTGCCAGCATGACAGCAAGCACGGACTGGCGGAGTTGAATGACCAAAGCTTCGGTTGCTTCCACTTGTGGCCTTCTTCGACCGCCTTGACACC
TTAATATCAGGGAACCCCCTCTCCTCTCTTCTTCTCTTCATGTATGTGGGCTGCCTGCCCCGTCCCGAATAGACGAACAGGAACAAGCTGAAGAAAGGCG
CGAGGGAGAGTTTATACTCAATGCACCTCCCCTCTTCCACAATTAGGTGAAGACCAGGGGGGCCGGAAACCCCAACGGGAAACCTTTCACCGCGCCACAC
GATTCTTTCGCGAAGCGCTCTCTCAGACGCACTCCTGCCTCTGCAAGCAAAGAGGTTTCAAAGATAAAGATACCAGGCGACCAAGTTAAAGTGAACAGCC
CCGAGCAAATCTTCTAGAGAGCGTACCCGTTGTAGCCAAACAAAAAAAAAGAAATGAACAGCAGCATCTATAGTTGTGGACAGTAAAAAAAAGAGGTTAT
TCGAAGCTGTGCTAATGGTGGTCAAGGATAAGGTACTAGCTTCAGTGGGAATTAGAATATGTTCCGTTAGTGTTCTCAGCGACCTTGCTTGGTCAACAAT
TTGGAGAGTTTGCGAAACGAAGACTTTCTAGAACAAATATTAAACCGGGAAAGGAAAAAAGGGGAAAAAGTAAAGAAAGTCACAAAGCATATGGCACGAA
AAGGAAATCCGATTTCGGTAAGACTCGATCTGAATCGTAGTTCAGATTCAAGTCGGTTCAGTGAGGGCGACCGCGAAAGTCACCGAATGGGTCAGTCTTT
TCCTTCAGTTTGTCCTATATATGTTGAATAAAAAAGCTTGGGATGGGAGGACGTAGCAGATGTCCGGGACGGACACGACTTCTTCTAACGCTAGAAGACC
ACTGGAAGAGACCCGGGACCAGAGCATGTCGTGAAAGAAGCACACCGGGCGGGCGTGCTTCGACCGTGTCTCCGGGGCACAGTTGAATGTAGATATCATG
AACGCGAGGTGCTGGATACCAGGCCAAGAAACCCGGCACCCCCTATGTGCCGATCGCTAGCGCATCCAGGGCCCCGGCGCCCTGCGGAGCTGGAGAGGCC
TAGCCTGATCTGAGAAGTGCTAATTCGGTTCGGATAGACTTCATTCAAGAACGCCGCCGCCCCAGGAATCAATAATAAAACAAGTGCTAAGTTTCAGATC
AGTGAATAAACCGAAACTAAAGAAGAAAGAGACCTTTCTCGCTCGGCGCCTAAAGCGCACTATGCTCCGCTTCAACAAATGAGAGTTTTCGGTGGAACCG
GTGAACCACGCGAGCTGATGCGTGGGGCAGAGGGCTCGTAGTACCTGCTAGCGCAGCTATGCAGTGGAAGGGAAGGAGCCTAAATCGAATCGACCCCCTT
ATTTTTTTTATTAATTTTTAAAATTAATAAAAAGTACAAAGAGATTAGACTCTCGGATGAGACTAAGCAGCCACCGACCGTTCCGACGCGCCCCTGACCT
ATTTTTTTATTAAGACCGAAAACCTATCTAAAATGGAGCCGGCTGTCAAACAAATGAGAAAATGGAAAATTTTTAATATAACCAAGGGATATGGATGGAG
TCTCGCTCAGTAAAGAGAGTTGTAGATTCCTAGAAAAGGAGAGGAGCCTTGACTTTCTATGATGTTATTAGTCAAGAAGCGCTAACGCTGCAATCTTTCT
AAAGCAAGAAGCGAGAAAGTTTACTTTGAGAAAGAAGGTGCTTGTTGCCGCTTTCTTCTTTTTTAATAGTAAGTAAACTTGTTTTGTTTTAGTTTTATAA
GGCGAAAGGTTGCTATTTTTTATAATTATTATAGCGTTAGCGCTTTTAGTTTTCAATAAGTTTAGGCTTGACTAAGAACATAGAAATGTTGAATCAGGGT
GCGCAGGGAACCCTATACAAAGGGCCTTTCCCTTCAAATGACAACTGCCTCTTCCTGCTGCGAAGGCCTTGCACGAAACCAACCCCCCCCCCACCCCCGA
TCCAGTACCTGTTGTTTCGCTGGTAGGCCCACTTAGGTTAGGGGGGCATTGTCCCTCAGTTCTTACCAACCTCCGGTGTGTAATCGACATGTTGCTAACT
TCAACTCGGTTGAATAAGAATCATTGATTCCCTTTGCTGTCCATTTATTATTCATTCAGGGCGCTCGGCCGGTGCTCCTTTTTTAAACCAGAACAACTCT
GGACGTTAGAGAAGATAAGATAAGATAAGGGAAGACCACCTGAGCGAACCGACCGAGGGGACTTGACTTATTCGAACCGAACGATAGCGGCTTAAAGCTA
AGCCTATCACGAGCAGCGTCGCAGCTTGATCGGCGGGGAGAAGCATCTCAAAGTATGGG