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Detailed information on CNT30201933


BLAST search results

BLAST vs Swiss-Prot:
sp|Q32902|PSBZ_PEA, E-value = 5e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369712Pisum sativumOryza glumipatula4.9430.998875reverse complement
CNT30646125Pisum sativumCannabis sativa6.7223.1383.33102forward

Expression of CNT30201933

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MEGFIMNPLILDDTPYWGMDRGVVFFISQKSWIMHI*

>peptide 2 (41 aa)
MTLLIEAWIEGLLDQPSGEANTTGTLINKMDEVTINAKTAN*

>peptide 3 (55 aa)
MREFRIPTRNTNPIHNDVPEKTTFLLLDQPSGEANTTGTLINKMDEVTINAKTAN*

>peptide 4 (32 aa)
MAEWLIAPVLKTGIVHFQKEIKKTFSLWRVLS*

>peptide 5 (38 aa)
MAEWLIAPVLKTGIVRNKELSRVRIPLSPFSWRMDFFY*

Sequence

>CNT30201933
ATTCAAGTTTTTAGTTTTACTATATATCTATATATCATATTAAGTATAAGATATAAGCTTTTTCCAATAGAAGGAGTTTGACCCCTCCCATTAATAATGT
TTTAGTTTTCTTTATTTGTGGGGTCTTATATATTCCATTTTCATGTGCCTCACACACAACCCGAAAGAATTCGGGGGGAGGGGTCGTTTCGTTTTTTGAT
CCAGAATGAATAGTTTCAAGAGATGAGAGAATTCAGAATACCCACTAGAAATACTAATCCAATCCATAATGATGTACCAGAAAAGACAACATTTTTGTTA
CTTGACCAACCATCGGGAGAAGCAAATACAACAGGTACACTAATTAATAAAATGGATGAAGTAACAATTAATGCAAAAACAGCTAATTGAAACGCAATAG
TCATGTTTAGAATCCTCTAATTTACCAACAAAAGAACTATACTATTTGATCCCCCAACCCCTTATTGACCCCTTCCAAAAAGAAATAAAAAAGACATTCT
CCTTATGGAGGGTTTTATCATGAATCCATTGATTTTAGATGACACTCCTTATTGAGGCATGGATCGAGGGATTACTTGACCAACCATCAGGAGAAGCAAA
TACAACAGGTACACTAATTAATAAAATGGATGAAGTAACAATTAATGCAAAAACAGCTAATTGAAACGCAATAGTCATGTTTAGAATCCTCTAATTTATC
AACAAAAGAACTATACCATTTGATCCCCCAACCCCTTATTGACCCCTTCCAAAAAGAAATAAAAAAGACATTCTCCTTATGGAGGGTTTTATCATGAATC
CATTGATTTTAGATGACACTCCTTATTGGGGCATGGATCGAGGGGTAGTTTTTTTTATTTCACAAAAGAGCTGGATCATGCATATATAATATATACGGAT
AGAGAACTAGACCAATAGATTCACACTGGATATCTTTATCATAGAGAGATATCTTTACCATAGAGAAAAGGGTATTAATTTGTATGGTCATGTTCTCTTG
AGTGGAATAAAGATAAAATAGAAATTATCTTTTGGAGAGATGGCTGAGTGGTTGATAGCTCCGGTCTTGAAAACCGGTATAGTTCACTTCCAAAAAGAAA
TAAAAAAGACATTCTCCTTATGGAGGGTTTTATCATGAATCCATTGATTTTAGATGACACTCCTTATTGAGGCATGGATCGAGGGGTAGTTTTTTTTATT
TCACAAAAGAGCAGGATCATGCATATATAATATATACGGATAGAGAACTAGACCAATAGATTCACACTGGATATCTTTATCATAGAGAGATATCTTTATC
ATAGAGAAAAGGGTATTAATTTGTATGGTCATGTTCTCTTGGGTGGAATAAAGATAAAATAGAAATTATCTTTTGGAGAGATGGCTGAGTGGTTGATAGC
TCCGGTCTTGAAAACCGGTATAGTTCGAAACAAAGAACTATCGAGGGTTCGAATCCCCCTCTCTCCTTTTTCTTGGCGAATGGATTTTTTTTATTGATTT
TGGTTGGCTCCGTTTTTT