CANTATAdb - search

Detailed information on CNT30199403

BLAST search results

BLAST vs Swiss-Prot:
sp|Q3C1H8|PSAA_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONVVIT000008, E-value = 3e-75

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30675574	Pisum sativum	Setaria viridis	8.5	66.38	88.96	154	forward
CNT30167792	Pisum sativum	Pistacia vera	15.13	82.78	89.42	274	forward

Expression of CNT30199403

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MIPSGFLACPPSSRAITREPKTKICFIRYQS*

>peptide 2 (42 aa)
MSPLFQGHHKGTENQDLLYPVSIVSYEQIEHLLGVSIPSHEM*

Sequence

>CNT30199403
CTCCTAGCCATTATCCTACTGCAATAATTCTTGCTAAGAAGAATGCCCACGTTGTGGCAATTCCACCCAGAAGGTAATGTGTTACTCCTACAGCACGTCC
CTGTACAATGCTCAAGGCTCTAGGCTGGGTAGCAGGAGCAACTTTTAATTTATTATGAGCCCAAACGATGGATTCAATAAGTTCTTGCCAATAACCACGC
CCGCTGAATAGAAACATTAAACTAAAAGCCCATACAAAATGGGCGCCTAAGAAAAAATGACCATATGCAGATAATGAGGAACCATAAGACTGAATTACCT
GGGATGCCTGCGCCCATAAGAAATCGCGAAGCCACCCATTAATGGTAATCGAACTCTGCGCAAAGTTTCCTCCTGTGATATGAGTTCCTACTCCTTGATC
ATTTATACTTCCCCAAACATCTGACTGCATTTTCCAACTGAAATGGAATATTACTACAGAAATTGCATTGTACATCCAAAATAATCCTAGGAAGACATGA
TCCCAAGCGGATACTTATACTACTCCTTGATCATTTATACTTCCCCAAACATCTGACTGCATTTTCCAACTGAAATGGAATATTACTACAGAAATTGCAT
TGTACATCCAAAATAATCCTAGGAAGACATGATCCCAAGCGGATTCTTGGCATGTCCCCCCTCTTCCAGGGCCATCACAAGGGAACCGAAAACCAAGATT
TGCTTTATCCGGTATCAATCGTGAGCTACGAGCAAATAGAACACCTTTTAGGAGTATCAATACCGTCACATGAAATGTAAATGCATGAATATGATGTACC
AAAAAATCTGCAGTTCCTAATGGAATAGGTAACAAAGCTACTTTGCCGCCCACTGACACTAAATCACCACCGCCCCAAGTCAAACTGGTGCTTGTTGTTG
CACCGGGGGCTGTTGTGCCAGGTGCTAAAGCATGGGTATTTTGTATCCATTGAGCAAAGACAGGTTGTAATTGTATAGCGGTATCTGAAAACATATCTTG
AGGGCGCCCTAAAGCACTCATGGTATCATTATGAATATACAACCCAAAACTGTGAAAGCCTAAAAATATACACCCCCAGTTGAGATGTGATATGATTGCA
TCACGATGTCTAAGAACACGATCTAATAGATCGTTGTATCGAGTAGTTGGATCATAGTCTCTTACCATAAAAATGGCTGCATGTGCAGCAGCACCAACTA
TGTGAAAGCCCCCAATCCACATGTGATGTGTGAACAATGACAGTTGTGTACCATAGTCAGTAGCTAGGTATGGATAAGGAGGCATAGCATACATATGGTG
AGCTACAATAATGGTCAAAGAGCCTAACATAGCTAGGTTAATAGATAATTGAGCATGCCATGACGTTGTTAGGATCTCATATAGACCTTTATGACCCTGG
CCTGTAAATGGACCTTTATGGGCGTCTAAAATATCTTTTATACCATGACCAATACCCCAGTTAGTTCTATACATATGACCCGCAATGAGAAAAAGAATTG
CAATAGCTAAATGATGATGTGCAATATCAGTCAGCCATAGACCACCAGTTAGGGGGTCTAATCCTCCACGAAAAGTAAGAAAGTCCGCGTATTTTGACCA
ATTCAAGGTAAAAAATGGGGTTGCTCCCTCAGCAAAACTTGGATAAAGTTGAGCCAAAAGATCCCGATTCAAGATAAATTCGTGAGGAAGTGGGATCTCT
TTGGGATCTACTCCAGCATTTAGAAATTGGTTAATTGGTAAAGATACATGTACTTGATGCCCCGCCCAAGAAAGAGACCCAAGTCCTAGTAGACCTGCCA
AATGGTGATTC